Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
TTC39BQ5VTQ0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TTC39BQ5VTQ0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TTC39BQ5VTQ0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
TTC39BQ5VTQ0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.62■■□□□ 1.05
TTC39BQ5VTQ0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.62■■□□□ 1.05
TTC39BQ5VTQ0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC39BQ5VTQ0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC39BQ5VTQ0 AC090192.1-201ENST00000517740 490 ntBASIC21.62■■□□□ 1.05
TTC39BQ5VTQ0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
TTC39BQ5VTQ0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TTC39BQ5VTQ0 AC010536.3-201ENST00000620306 533 ntBASIC21.62■■□□□ 1.05
TTC39BQ5VTQ0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.62■■□□□ 1.05
TTC39BQ5VTQ0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC39BQ5VTQ0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC39BQ5VTQ0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TTC39BQ5VTQ0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC39BQ5VTQ0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TTC39BQ5VTQ0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 AC061975.6-201ENST00000579045 1553 ntBASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 AC231657.2-201ENST00000624556 255 ntBASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.61■■□□□ 1.05
TTC39BQ5VTQ0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TTC39BQ5VTQ0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TTC39BQ5VTQ0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TTC39BQ5VTQ0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TTC39BQ5VTQ0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
TTC39BQ5VTQ0 FEM1AP4-201ENST00000443167 1987 ntBASIC21.6■■□□□ 1.05
TTC39BQ5VTQ0 CDCA4P2-201ENST00000441182 718 ntBASIC21.6■■□□□ 1.05
TTC39BQ5VTQ0 AC026185.1-201ENST00000445748 174 ntBASIC21.6■■□□□ 1.05
TTC39BQ5VTQ0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.6■■□□□ 1.05
TTC39BQ5VTQ0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.6■■□□□ 1.05
TTC39BQ5VTQ0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
TTC39BQ5VTQ0 RAP2CP1-201ENST00000605103 478 ntBASIC21.6■■□□□ 1.05
TTC39BQ5VTQ0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.6■■□□□ 1.05
TTC39BQ5VTQ0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.6■■□□□ 1.05
TTC39BQ5VTQ0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39BQ5VTQ0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.59■■□□□ 1.05
TTC39BQ5VTQ0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39BQ5VTQ0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39BQ5VTQ0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39BQ5VTQ0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TTC39BQ5VTQ0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39BQ5VTQ0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39BQ5VTQ0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39BQ5VTQ0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39BQ5VTQ0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.59■■□□□ 1.05
TTC39BQ5VTQ0 DUX4L16-201ENST00000555130 1264 ntBASIC21.59■■□□□ 1.05
TTC39BQ5VTQ0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.59■■□□□ 1.05
TTC39BQ5VTQ0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.59■■□□□ 1.05
TTC39BQ5VTQ0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39BQ5VTQ0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
TTC39BQ5VTQ0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39BQ5VTQ0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.59■■□□□ 1.05
TTC39BQ5VTQ0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TTC39BQ5VTQ0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TTC39BQ5VTQ0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TTC39BQ5VTQ0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
TTC39BQ5VTQ0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms