Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 DOP1YDR141C 5097 nt0.94□□□□□ -2.26
VPS13Q07878 MES1YGR264C 2256 nt0.94□□□□□ -2.26
VPS13Q07878 NCL1YBL024W 2055 nt0.94□□□□□ -2.26
VPS13Q07878 YLR169WYLR169W 354 nt0.93□□□□□ -2.26
VPS13Q07878 ACM1YPL267W 630 nt0.93□□□□□ -2.26
VPS13Q07878 TRS130YMR218C 3309 nt0.93□□□□□ -2.26
VPS13Q07878 YKL165C-AYKL165C-A 234 nt0.93□□□□□ -2.26
VPS13Q07878 RPN8YOR261C 1017 nt0.93□□□□□ -2.26
VPS13Q07878 RAD18YCR066W 1464 nt0.93□□□□□ -2.26
VPS13Q07878 MMS22YLR320W 4365 nt0.93□□□□□ -2.26
VPS13Q07878 YDL023CYDL023C 321 nt0.93□□□□□ -2.26
VPS13Q07878 UTP21YLR409C 2820 nt0.92□□□□□ -2.26
VPS13Q07878 SCL1YGL011C 759 nt0.92□□□□□ -2.26
VPS13Q07878 NAT5YOR253W 531 nt0.92□□□□□ -2.26
VPS13Q07878 SET6YPL165C 1122 nt0.92□□□□□ -2.26
VPS13Q07878 GCD2YGR083C 1956 nt0.92□□□□□ -2.26
VPS13Q07878 YDR098C-BYDR098C-B 5268 nt0.92□□□□□ -2.26
VPS13Q07878 YDR210C-DYDR210C-D 5268 nt0.92□□□□□ -2.26
VPS13Q07878 YDR316W-BYDR316W-B 5268 nt0.92□□□□□ -2.26
VPS13Q07878 YDR365W-BYDR365W-B 5268 nt0.92□□□□□ -2.26
VPS13Q07878 YER138CYER138C 5268 nt0.92□□□□□ -2.26
VPS13Q07878 YGR038C-BYGR038C-B 5268 nt0.92□□□□□ -2.26
VPS13Q07878 YGR161C-DYGR161C-D 5268 nt0.92□□□□□ -2.26
VPS13Q07878 YJR029WYJR029W 5268 nt0.92□□□□□ -2.26
VPS13Q07878 YLR157C-BYLR157C-B 5268 nt0.92□□□□□ -2.26
VPS13Q07878 YML039WYML039W 5268 nt0.92□□□□□ -2.26
VPS13Q07878 YML045WYML045W 5268 nt0.92□□□□□ -2.26
VPS13Q07878 YMR050CYMR050C 5268 nt0.92□□□□□ -2.26
VPS13Q07878 YNL054W-BYNL054W-B 5250 nt0.92□□□□□ -2.26
VPS13Q07878 YNL284C-BYNL284C-B 5268 nt0.92□□□□□ -2.26
VPS13Q07878 YOL103W-BYOL103W-B 5268 nt0.92□□□□□ -2.26
VPS13Q07878 YBR012W-BYBR012W-B 5271 nt0.92□□□□□ -2.26
VPS13Q07878 YOR142W-BYOR142W-B 5268 nt0.92□□□□□ -2.26
VPS13Q07878 YPL257W-BYPL257W-B 5268 nt0.92□□□□□ -2.26
VPS13Q07878 YPR137C-BYPR137C-B 5268 nt0.92□□□□□ -2.26
VPS13Q07878 YDR521WYDR521W 336 nt0.92□□□□□ -2.26
VPS13Q07878 BUD19YJL188C 309 nt0.92□□□□□ -2.26
VPS13Q07878 CTM1YHR109W 1758 nt0.92□□□□□ -2.26
VPS13Q07878 GPI17YDR434W 1605 nt0.92□□□□□ -2.26
VPS13Q07878 SAC3YDR159W 3906 nt0.91□□□□□ -2.26
VPS13Q07878 PIS1YPR113W 663 nt0.91□□□□□ -2.26
VPS13Q07878 CDC39YCR093W 6327 nt0.91□□□□□ -2.26
VPS13Q07878 SMP3YOR149C 1551 nt0.91□□□□□ -2.26
VPS13Q07878 tT(AGU)BtT(AGU)B 73 nt0.91□□□□□ -2.26
VPS13Q07878 tT(AGU)CtT(AGU)C 73 nt0.91□□□□□ -2.26
VPS13Q07878 tT(AGU)DtT(AGU)D 73 nt0.91□□□□□ -2.26
VPS13Q07878 tT(AGU)HtT(AGU)H 73 nt0.91□□□□□ -2.26
VPS13Q07878 tT(AGU)I1tT(AGU)I1 73 nt0.91□□□□□ -2.26
VPS13Q07878 tT(AGU)I2tT(AGU)I2 73 nt0.91□□□□□ -2.26
VPS13Q07878 tT(AGU)JtT(AGU)J 73 nt0.91□□□□□ -2.26
VPS13Q07878 tT(AGU)N1tT(AGU)N1 73 nt0.91□□□□□ -2.26
VPS13Q07878 tT(AGU)N2tT(AGU)N2 73 nt0.91□□□□□ -2.26
VPS13Q07878 tT(AGU)O1tT(AGU)O1 73 nt0.91□□□□□ -2.26
VPS13Q07878 tT(AGU)O2tT(AGU)O2 73 nt0.91□□□□□ -2.26
VPS13Q07878 RPN5YDL147W 1338 nt0.9□□□□□ -2.26
VPS13Q07878 YRB30YGL164C 1323 nt0.9□□□□□ -2.26
VPS13Q07878 YPR117WYPR117W 7470 nt0.9□□□□□ -2.27
VPS13Q07878 YER078W-AYER078W-A 165 nt0.9□□□□□ -2.27
VPS13Q07878 OST2YOR103C 393 nt0.9□□□□□ -2.27
VPS13Q07878 AHC1YOR023C 1701 nt0.9□□□□□ -2.27
VPS13Q07878 MSN2YMR037C 2115 nt0.9□□□□□ -2.27
VPS13Q07878 YER165C-AYER165C-A 357 nt0.9□□□□□ -2.27
VPS13Q07878 ARI1YGL157W 1044 nt0.9□□□□□ -2.27
VPS13Q07878 ATP11YNL315C 957 nt0.9□□□□□ -2.27
VPS13Q07878 YOR218CYOR218C 420 nt0.89□□□□□ -2.27
VPS13Q07878 YKU80YMR106C 1890 nt0.89□□□□□ -2.27
VPS13Q07878 RGP1YDR137W 1992 nt0.89□□□□□ -2.27
VPS13Q07878 SEC1YDR164C 2175 nt0.89□□□□□ -2.27
VPS13Q07878 FIG4YNL325C 2640 nt0.89□□□□□ -2.27
VPS13Q07878 IAH1YOR126C 717 nt0.89□□□□□ -2.27
VPS13Q07878 ARR2YPR200C 393 nt0.89□□□□□ -2.27
VPS13Q07878 CSF1YLR087C 8877 nt0.89□□□□□ -2.27
VPS13Q07878 MSM1YGR171C 1728 nt0.89□□□□□ -2.27
VPS13Q07878 CYC7YEL039C 342 nt0.89□□□□□ -2.27
VPS13Q07878 ULI1YFR026C 510 nt0.88□□□□□ -2.27
VPS13Q07878 AIM4YBR194W 372 nt0.88□□□□□ -2.27
VPS13Q07878 UTP6YDR449C 1323 nt0.88□□□□□ -2.27
VPS13Q07878 SPO24YPR036W-A 204 nt0.88□□□□□ -2.27
VPS13Q07878 YSY6YBR162W-A 198 nt0.88□□□□□ -2.27
VPS13Q07878 YFH7YFR007W 1062 nt0.87□□□□□ -2.27
VPS13Q07878 MRP10YDL045W-A 288 nt0.87□□□□□ -2.27
VPS13Q07878 RPL16AYIL133C 600 nt0.87□□□□□ -2.27
VPS13Q07878 KCS1YDR017C 3153 nt0.87□□□□□ -2.27
VPS13Q07878 YDR170W-AYDR170W-A 1323 nt0.87□□□□□ -2.27
VPS13Q07878 DBP5YOR046C 1449 nt0.87□□□□□ -2.27
VPS13Q07878 RKM1YPL208W 1752 nt0.86□□□□□ -2.27
VPS13Q07878 STE24YJR117W 1362 nt0.86□□□□□ -2.27
VPS13Q07878 IRC4YDR540C 540 nt0.86□□□□□ -2.27
VPS13Q07878 OST6YML019W 999 nt0.86□□□□□ -2.27
VPS13Q07878 GPP2YER062C 753 nt0.86□□□□□ -2.27
VPS13Q07878 YBR063CYBR063C 1215 nt0.86□□□□□ -2.27
VPS13Q07878 SLY41YOR307C 1362 nt0.86□□□□□ -2.27
VPS13Q07878 SPC98YNL126W 2541 nt0.85□□□□□ -2.27
VPS13Q07878 YDR261C-DYDR261C-D 4815 nt0.85□□□□□ -2.27
VPS13Q07878 PEX11YOL147C 711 nt0.85□□□□□ -2.27
VPS13Q07878 RAD9YDR217C 3930 nt0.85□□□□□ -2.27
VPS13Q07878 RIF2YLR453C 1188 nt0.85□□□□□ -2.27
VPS13Q07878 VAM10YOR068C 345 nt0.85□□□□□ -2.27
VPS13Q07878 BUD2YKL092C 3315 nt0.85□□□□□ -2.27
VPS13Q07878 YGR237CYGR237C 2358 nt0.85□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 45.5 ms