Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 TSPY26P-201ENST00000476365 1326 ntBASIC15.82■□□□□ 0.12
HIST1H1AQ02539 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1AQ02539 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.81■□□□□ 0.12
HIST1H1AQ02539 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H1AQ02539 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H1AQ02539 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H1AQ02539 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H1AQ02539 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H1AQ02539 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HIST1H1AQ02539 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H1AQ02539 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H1AQ02539 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.81■□□□□ 0.12
HIST1H1AQ02539 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
HIST1H1AQ02539 AC133561.4-201ENST00000566112 224 ntBASIC15.81■□□□□ 0.12
HIST1H1AQ02539 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H1AQ02539 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.81■□□□□ 0.12
HIST1H1AQ02539 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.81■□□□□ 0.12
HIST1H1AQ02539 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
HIST1H1AQ02539 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H1AQ02539 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HIST1H1AQ02539 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.81■□□□□ 0.12
HIST1H1AQ02539 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 AC106739.1-201ENST00000617035 715 ntBASIC15.8■□□□□ 0.12
HIST1H1AQ02539 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 AC105233.4-201ENST00000642045 216 ntBASIC15.8■□□□□ 0.12
HIST1H1AQ02539 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HIST1H1AQ02539 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
HIST1H1AQ02539 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H1AQ02539 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HIST1H1AQ02539 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H1AQ02539 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H1AQ02539 EDA-201ENST00000338901 1233 ntBASIC15.79■□□□□ 0.12
HIST1H1AQ02539 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.79■□□□□ 0.12
HIST1H1AQ02539 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HIST1H1AQ02539 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.79■□□□□ 0.12
HIST1H1AQ02539 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H1AQ02539 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H1AQ02539 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC15.79■□□□□ 0.12
HIST1H1AQ02539 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H1AQ02539 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HIST1H1AQ02539 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H1AQ02539 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H1AQ02539 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H1AQ02539 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HIST1H1AQ02539 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HIST1H1AQ02539 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HIST1H1AQ02539 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms