Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PRAMEP78395 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.89■□□□□ 0.94
PRAMEP78395 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRAMEP78395 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRAMEP78395 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRAMEP78395 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.89■□□□□ 0.93
PRAMEP78395 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRAMEP78395 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEP78395 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEP78395 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEP78395 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEP78395 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEP78395 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PRAMEP78395 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEP78395 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEP78395 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEP78395 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.88■□□□□ 0.93
PRAMEP78395 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.88■□□□□ 0.93
PRAMEP78395 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.88■□□□□ 0.93
PRAMEP78395 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.88■□□□□ 0.93
PRAMEP78395 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.88■□□□□ 0.93
PRAMEP78395 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.88■□□□□ 0.93
PRAMEP78395 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.88■□□□□ 0.93
PRAMEP78395 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.88■□□□□ 0.93
PRAMEP78395 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEP78395 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.88■□□□□ 0.93
PRAMEP78395 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEP78395 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PRAMEP78395 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEP78395 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEP78395 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEP78395 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEP78395 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEP78395 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.87■□□□□ 0.93
PRAMEP78395 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEP78395 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.87■□□□□ 0.93
PRAMEP78395 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
PRAMEP78395 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PRAMEP78395 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PRAMEP78395 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PRAMEP78395 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.87■□□□□ 0.93
PRAMEP78395 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEP78395 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEP78395 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.87■□□□□ 0.93
PRAMEP78395 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEP78395 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PRAMEP78395 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.87■□□□□ 0.93
PRAMEP78395 AC104187.1-201ENST00000607510 612 ntBASIC20.87■□□□□ 0.93
PRAMEP78395 AC120498.10-201ENST00000621827 505 ntBASIC20.87■□□□□ 0.93
PRAMEP78395 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEP78395 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEP78395 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEP78395 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.87■□□□□ 0.93
PRAMEP78395 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEP78395 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEP78395 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEP78395 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
PRAMEP78395 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.86■□□□□ 0.93
PRAMEP78395 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PRAMEP78395 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEP78395 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEP78395 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEP78395 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEP78395 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEP78395 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEP78395 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.86■□□□□ 0.93
PRAMEP78395 AC010141.2-201ENST00000452426 721 ntBASIC20.86■□□□□ 0.93
PRAMEP78395 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.86■□□□□ 0.93
PRAMEP78395 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.86■□□□□ 0.93
PRAMEP78395 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.86■□□□□ 0.93
PRAMEP78395 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEP78395 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.86■□□□□ 0.93
PRAMEP78395 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEP78395 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEP78395 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEP78395 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PRAMEP78395 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEP78395 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEP78395 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEP78395 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEP78395 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PRAMEP78395 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.85■□□□□ 0.93
PRAMEP78395 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PRAMEP78395 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEP78395 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.85■□□□□ 0.93
PRAMEP78395 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.85■□□□□ 0.93
PRAMEP78395 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.85■□□□□ 0.93
PRAMEP78395 DUX4L2-201ENST00000561772 1275 ntBASIC20.85■□□□□ 0.93
PRAMEP78395 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.85■□□□□ 0.93
PRAMEP78395 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.85■□□□□ 0.93
PRAMEP78395 DUX4L6-201ENST00000626483 1275 ntBASIC20.85■□□□□ 0.93
PRAMEP78395 DUX4L1-201ENST00000627662 1275 ntBASIC20.85■□□□□ 0.93
PRAMEP78395 DUX4L8-201ENST00000629013 1275 ntBASIC20.85■□□□□ 0.93
PRAMEP78395 DUX4L3-201ENST00000630187 1275 ntBASIC20.85■□□□□ 0.93
PRAMEP78395 DUX4L7-201ENST00000630678 1275 ntBASIC20.85■□□□□ 0.93
PRAMEP78395 DUX4L5-201ENST00000630834 1275 ntBASIC20.85■□□□□ 0.93
PRAMEP78395 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEP78395 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEP78395 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.85■□□□□ 0.93
PRAMEP78395 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms