Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4XP62701 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4XP62701 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RPS4XP62701 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4XP62701 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4XP62701 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.78■□□□□ 0.6
RPS4XP62701 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4XP62701 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4XP62701 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPS4XP62701 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4XP62701 FEM1AP1-201ENST00000431297 1995 ntBASIC18.77■□□□□ 0.6
RPS4XP62701 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4XP62701 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4XP62701 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPS4XP62701 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RPS4XP62701 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
RPS4XP62701 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.77■□□□□ 0.6
RPS4XP62701 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
RPS4XP62701 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RPS4XP62701 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
RPS4XP62701 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.76■□□□□ 0.59
RPS4XP62701 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RPS4XP62701 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4XP62701 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4XP62701 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4XP62701 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4XP62701 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.76■□□□□ 0.59
RPS4XP62701 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4XP62701 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.76■□□□□ 0.59
RPS4XP62701 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.76■□□□□ 0.59
RPS4XP62701 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.76■□□□□ 0.59
RPS4XP62701 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4XP62701 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.76■□□□□ 0.59
RPS4XP62701 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4XP62701 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4XP62701 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4XP62701 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.76■□□□□ 0.59
RPS4XP62701 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4XP62701 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPS4XP62701 AC061975.6-201ENST00000579045 1553 ntBASIC18.76■□□□□ 0.59
RPS4XP62701 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RPS4XP62701 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RPS4XP62701 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RPS4XP62701 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RPS4XP62701 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4XP62701 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4XP62701 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4XP62701 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.75■□□□□ 0.59
RPS4XP62701 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
RPS4XP62701 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.75■□□□□ 0.59
RPS4XP62701 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4XP62701 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4XP62701 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.75■□□□□ 0.59
RPS4XP62701 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4XP62701 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4XP62701 KRT87P-202ENST00000534226 1464 ntBASIC18.75■□□□□ 0.59
RPS4XP62701 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.75■□□□□ 0.59
RPS4XP62701 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.75■□□□□ 0.59
RPS4XP62701 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.75■□□□□ 0.59
RPS4XP62701 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPS4XP62701 AC121338.2-201ENST00000622535 1744 ntBASIC18.74■□□□□ 0.59
RPS4XP62701 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4XP62701 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RPS4XP62701 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4XP62701 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4XP62701 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RPS4XP62701 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4XP62701 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.74■□□□□ 0.59
RPS4XP62701 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4XP62701 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4XP62701 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RPS4XP62701 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RPS4XP62701 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4XP62701 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.74■□□□□ 0.59
RPS4XP62701 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RPS4XP62701 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RPS4XP62701 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4XP62701 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.73■□□□□ 0.59
RPS4XP62701 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4XP62701 AP004607.4-201ENST00000530158 1459 ntBASIC18.73■□□□□ 0.59
RPS4XP62701 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RPS4XP62701 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4XP62701 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RPS4XP62701 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.73■□□□□ 0.59
RPS4XP62701 AC079140.4-201ENST00000507448 529 ntBASIC18.73■□□□□ 0.59
RPS4XP62701 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4XP62701 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.73■□□□□ 0.59
RPS4XP62701 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.73■□□□□ 0.59
RPS4XP62701 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4XP62701 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4XP62701 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4XP62701 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.73■□□□□ 0.59
RPS4XP62701 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.73■□□□□ 0.59
RPS4XP62701 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPS4XP62701 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4XP62701 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4XP62701 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RPS4XP62701 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.72■□□□□ 0.59
RPS4XP62701 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPS4XP62701 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms