Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 SEN54YPL083C 1404 nt3.61□□□□□ -1.83
TDP1P38319 MFA1YDR461W 111 nt3.61□□□□□ -1.83
TDP1P38319 SLD5YDR489W 885 nt3.61□□□□□ -1.83
TDP1P38319 YFL015CYFL015C 495 nt3.61□□□□□ -1.83
TDP1P38319 YGL152CYGL152C 678 nt3.61□□□□□ -1.83
TDP1P38319 CRG1YHR209W 876 nt3.61□□□□□ -1.83
TDP1P38319 YJR079WYJR079W 330 nt3.61□□□□□ -1.83
TDP1P38319 YKL069WYKL069W 543 nt3.61□□□□□ -1.83
TDP1P38319 MYO3YKL129C 3819 nt3.61□□□□□ -1.83
TDP1P38319 ERG2YMR202W 669 nt3.61□□□□□ -1.83
TDP1P38319 INN1YNL152W 1230 nt3.61□□□□□ -1.83
TDP1P38319 NOG1YPL093W 1944 nt3.61□□□□□ -1.83
TDP1P38319 TAF1YGR274C 3201 nt3.61□□□□□ -1.83
TDP1P38319 TAF6YGL112C 1551 nt3.6□□□□□ -1.83
TDP1P38319 PDR12YPL058C 4536 nt3.6□□□□□ -1.83
TDP1P38319 snR59snR59 78 nt3.6□□□□□ -1.83
TDP1P38319 MRPL31YKL138C 396 nt3.6□□□□□ -1.83
TDP1P38319 YBL028CYBL028C 321 nt3.6□□□□□ -1.83
TDP1P38319 YPR096CYPR096C 303 nt3.6□□□□□ -1.83
TDP1P38319 MNT4YNR059W 1743 nt3.6□□□□□ -1.83
TDP1P38319 YBR012W-AYBR012W-A 1323 nt3.6□□□□□ -1.83
TDP1P38319 YOR142W-AYOR142W-A 1323 nt3.6□□□□□ -1.83
TDP1P38319 YPR158W-AYPR158W-A 1323 nt3.6□□□□□ -1.83
TDP1P38319 VPS9YML097C 1356 nt3.6□□□□□ -1.83
TDP1P38319 SEC6YIL068C 2418 nt3.6□□□□□ -1.83
TDP1P38319 RAD26YJR035W 3258 nt3.59□□□□□ -1.83
TDP1P38319 REB1YBR049C 2433 nt3.59□□□□□ -1.83
TDP1P38319 PSP1YDR505C 2526 nt3.59□□□□□ -1.83
TDP1P38319 YCR018C-AYCR018C-A 255 nt3.59□□□□□ -1.83
TDP1P38319 TRX3YCR083W 384 nt3.59□□□□□ -1.83
TDP1P38319 YDR464C-AYDR464C-A 189 nt3.59□□□□□ -1.83
TDP1P38319 UTP30YKR060W 825 nt3.59□□□□□ -1.83
TDP1P38319 ECM4YKR076W 1113 nt3.59□□□□□ -1.83
TDP1P38319 CMD1YBR109C 444 nt3.59□□□□□ -1.83
TDP1P38319 YJR098CYJR098C 1971 nt3.59□□□□□ -1.83
TDP1P38319 PRP22YER013W 3438 nt3.59□□□□□ -1.83
TDP1P38319 SSF2YDR312W 1362 nt3.59□□□□□ -1.83
TDP1P38319 NCS2YNL119W 1482 nt3.59□□□□□ -1.84
TDP1P38319 SSE2YBR169C 2082 nt3.58□□□□□ -1.84
TDP1P38319 CPA2YJR109C 3357 nt3.58□□□□□ -1.84
TDP1P38319 YCR090CYCR090C 549 nt3.58□□□□□ -1.84
TDP1P38319 FMN1YDR236C 657 nt3.58□□□□□ -1.84
TDP1P38319 SUP56tL(CAA)A 82 nt3.58□□□□□ -1.84
TDP1P38319 SUP53tL(CAA)C 82 nt3.58□□□□□ -1.84
TDP1P38319 tL(CAA)DtL(CAA)D 82 nt3.58□□□□□ -1.84
TDP1P38319 tL(CAA)G1tL(CAA)G1 82 nt3.58□□□□□ -1.84
TDP1P38319 SUP54tL(CAA)G2 82 nt3.58□□□□□ -1.84
TDP1P38319 tL(CAA)G3tL(CAA)G3 82 nt3.58□□□□□ -1.84
TDP1P38319 tL(CAA)KtL(CAA)K 82 nt3.58□□□□□ -1.84
TDP1P38319 tL(CAA)LtL(CAA)L 82 nt3.58□□□□□ -1.84
TDP1P38319 tL(CAA)MtL(CAA)M 82 nt3.58□□□□□ -1.84
TDP1P38319 tL(CAA)NtL(CAA)N 82 nt3.58□□□□□ -1.84
TDP1P38319 PEX4YGR133W 552 nt3.58□□□□□ -1.84
TDP1P38319 YHL037CYHL037C 402 nt3.58□□□□□ -1.84
TDP1P38319 UTP11YKL099C 753 nt3.58□□□□□ -1.84
TDP1P38319 AAR2YBL074C 1068 nt3.58□□□□□ -1.84
TDP1P38319 GRE2YOL151W 1029 nt3.58□□□□□ -1.84
TDP1P38319 YJR030CYJR030C 2238 nt3.58□□□□□ -1.84
TDP1P38319 YDL152WYDL152W 366 nt3.57□□□□□ -1.84
TDP1P38319 CDC45YLR103C 1953 nt3.57□□□□□ -1.84
TDP1P38319 SHE4YOR035C 2370 nt3.57□□□□□ -1.84
TDP1P38319 KIN4YOR233W 2403 nt3.57□□□□□ -1.84
TDP1P38319 ERB1YMR049C 2424 nt3.56□□□□□ -1.84
TDP1P38319 HRD1YOL013C 1656 nt3.56□□□□□ -1.84
TDP1P38319 YDR089WYDR089W 2610 nt3.56□□□□□ -1.84
TDP1P38319 AHC2YCR082W 387 nt3.56□□□□□ -1.84
TDP1P38319 MRPL11YDL202W 750 nt3.56□□□□□ -1.84
TDP1P38319 HTA1YDR225W 399 nt3.56□□□□□ -1.84
TDP1P38319 FRQ1YDR373W 573 nt3.56□□□□□ -1.84
TDP1P38319 OTU1YFL044C 906 nt3.56□□□□□ -1.84
TDP1P38319 YGR035CYGR035C 351 nt3.56□□□□□ -1.84
TDP1P38319 SPT4YGR063C 309 nt3.56□□□□□ -1.84
TDP1P38319 TDA8YAL064C-A 381 nt3.56□□□□□ -1.84
TDP1P38319 YML009C-AYML009C-A 327 nt3.56□□□□□ -1.84
TDP1P38319 RIM9YMR063W 720 nt3.56□□□□□ -1.84
TDP1P38319 AFT2YPL202C 1251 nt3.56□□□□□ -1.84
TDP1P38319 snR65snR65 100 nt3.55□□□□□ -1.84
TDP1P38319 snR68snR68 136 nt3.55□□□□□ -1.84
TDP1P38319 CPR5YDR304C 678 nt3.55□□□□□ -1.84
TDP1P38319 YDR537CYDR537C 606 nt3.55□□□□□ -1.84
TDP1P38319 YKL068W-AYKL068W-A 237 nt3.55□□□□□ -1.84
TDP1P38319 YKL183C-AYKL183C-A 213 nt3.55□□□□□ -1.84
TDP1P38319 ARV1YLR242C 966 nt3.55□□□□□ -1.84
TDP1P38319 YNL337WYNL337W 255 nt3.55□□□□□ -1.84
TDP1P38319 VAM10YOR068C 345 nt3.55□□□□□ -1.84
TDP1P38319 FAS1YKL182W 6156 nt3.55□□□□□ -1.84
TDP1P38319 LOS1YKL205W 3303 nt3.55□□□□□ -1.84
TDP1P38319 FLO10YKR102W 3510 nt3.54□□□□□ -1.84
TDP1P38319 MRH1YDR033W 963 nt3.54□□□□□ -1.84
TDP1P38319 YEL075CYEL075C 369 nt3.54□□□□□ -1.84
TDP1P38319 YHR052W-AYHR052W-A 195 nt3.54□□□□□ -1.84
TDP1P38319 YHR054W-AYHR054W-A 195 nt3.54□□□□□ -1.84
TDP1P38319 COX8YLR395C 237 nt3.54□□□□□ -1.84
TDP1P38319 YBR032WYBR032W 303 nt3.54□□□□□ -1.84
TDP1P38319 DPB3YBR278W 606 nt3.54□□□□□ -1.84
TDP1P38319 ALA1YOR335C 2877 nt3.53□□□□□ -1.84
TDP1P38319 APC5YOR249C 2058 nt3.53□□□□□ -1.84
TDP1P38319 NHP2YDL208W 471 nt3.53□□□□□ -1.84
TDP1P38319 YDR262WYDR262W 819 nt3.53□□□□□ -1.84
TDP1P38319 AAD16YFL057C 459 nt3.53□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 36 ms