Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 YIR014WYIR014W 729 nt4.34□□□□□ -1.71
MSH3P25336 ARV1YLR242C 966 nt4.34□□□□□ -1.71
MSH3P25336 ALO1YML086C 1581 nt4.34□□□□□ -1.71
MSH3P25336 RAD54YGL163C 2697 nt4.34□□□□□ -1.72
MSH3P25336 YNR063WYNR063W 1824 nt4.33□□□□□ -1.72
MSH3P25336 GWT1YJL091C 1473 nt4.33□□□□□ -1.72
MSH3P25336 YDL228CYDL228C 642 nt4.33□□□□□ -1.72
MSH3P25336 YHR212CYHR212C 336 nt4.33□□□□□ -1.72
MSH3P25336 YAL037WYAL037W 804 nt4.33□□□□□ -1.72
MSH3P25336 YAR060CYAR060C 336 nt4.33□□□□□ -1.72
MSH3P25336 YBL028CYBL028C 321 nt4.33□□□□□ -1.72
MSH3P25336 RPL16BYNL069C 597 nt4.33□□□□□ -1.72
MSH3P25336 GAC1YOR178C 2382 nt4.33□□□□□ -1.72
MSH3P25336 IRC3YDR332W 2070 nt4.33□□□□□ -1.72
MSH3P25336 YLR177WYLR177W 1887 nt4.32□□□□□ -1.72
MSH3P25336 VAC8YEL013W 1737 nt4.32□□□□□ -1.72
MSH3P25336 UTP15YMR093W 1542 nt4.32□□□□□ -1.72
MSH3P25336 IOC2YLR095C 2439 nt4.32□□□□□ -1.72
MSH3P25336 CGR1YGL029W 363 nt4.32□□□□□ -1.72
MSH3P25336 RPS4BYHR203C 786 nt4.32□□□□□ -1.72
MSH3P25336 YOR282WYOR282W 321 nt4.32□□□□□ -1.72
MSH3P25336 MTC4YBR255W 2085 nt4.32□□□□□ -1.72
MSH3P25336 SWH1YAR042W 3567 nt4.32□□□□□ -1.72
MSH3P25336 MCD4YKL165C 2760 nt4.32□□□□□ -1.72
MSH3P25336 EAP1YKL204W 1899 nt4.32□□□□□ -1.72
MSH3P25336 HFD1YMR110C 1599 nt4.31□□□□□ -1.72
MSH3P25336 GDI1YER136W 1356 nt4.31□□□□□ -1.72
MSH3P25336 CHA4YLR098C 1947 nt4.31□□□□□ -1.72
MSH3P25336 MVB12YGR206W 306 nt4.31□□□□□ -1.72
MSH3P25336 HIS5YIL116W 1158 nt4.31□□□□□ -1.72
MSH3P25336 RMP1YLR145W 606 nt4.31□□□□□ -1.72
MSH3P25336 YNL043CYNL043C 321 nt4.31□□□□□ -1.72
MSH3P25336 PGS1YCL004W 1566 nt4.31□□□□□ -1.72
MSH3P25336 DBF20YPR111W 1695 nt4.3□□□□□ -1.72
MSH3P25336 MRPL11YDL202W 750 nt4.3□□□□□ -1.72
MSH3P25336 YDR526CYDR526C 471 nt4.3□□□□□ -1.72
MSH3P25336 tL(UAG)JtL(UAG)J 82 nt4.3□□□□□ -1.72
MSH3P25336 tL(UAG)L1tL(UAG)L1 82 nt4.3□□□□□ -1.72
MSH3P25336 tL(UAG)L2tL(UAG)L2 82 nt4.3□□□□□ -1.72
MSH3P25336 MRPL31YKL138C 396 nt4.3□□□□□ -1.72
MSH3P25336 YLR434CYLR434C 384 nt4.3□□□□□ -1.72
MSH3P25336 YML009C-AYML009C-A 327 nt4.3□□□□□ -1.72
MSH3P25336 YNL146C-AYNL146C-A 195 nt4.3□□□□□ -1.72
MSH3P25336 RRD2YPL152W 1077 nt4.3□□□□□ -1.72
MSH3P25336 YJR098CYJR098C 1971 nt4.3□□□□□ -1.72
MSH3P25336 EBS1YDR206W 2655 nt4.3□□□□□ -1.72
MSH3P25336 BUD5YCR038C 1929 nt4.29□□□□□ -1.72
MSH3P25336 ELM1YKL048C 1923 nt4.29□□□□□ -1.72
MSH3P25336 GPI17YDR434W 1605 nt4.29□□□□□ -1.72
MSH3P25336 TRX3YCR083W 384 nt4.29□□□□□ -1.72
MSH3P25336 RPS29BYDL061C 171 nt4.29□□□□□ -1.72
MSH3P25336 YDR431WYDR431W 312 nt4.29□□□□□ -1.72
MSH3P25336 TCD1YHR003C 1290 nt4.29□□□□□ -1.72
MSH3P25336 YJL169WYJL169W 369 nt4.29□□□□□ -1.72
MSH3P25336 CDC33YOL139C 642 nt4.29□□□□□ -1.72
MSH3P25336 FRM2YCL026C-A 582 nt4.29□□□□□ -1.72
MSH3P25336 GNT1YOR320C 1476 nt4.29□□□□□ -1.72
MSH3P25336 OST1YJL002C 1431 nt4.29□□□□□ -1.72
MSH3P25336 AYT1YLL063C 1425 nt4.29□□□□□ -1.72
MSH3P25336 YNL193WYNL193W 1677 nt4.29□□□□□ -1.72
MSH3P25336 ERG5YMR015C 1617 nt4.28□□□□□ -1.72
MSH3P25336 YEL075CYEL075C 369 nt4.28□□□□□ -1.72
MSH3P25336 VOA1YGR106C 798 nt4.28□□□□□ -1.72
MSH3P25336 YHL037CYHL037C 402 nt4.28□□□□□ -1.72
MSH3P25336 YHR052W-AYHR052W-A 195 nt4.28□□□□□ -1.72
MSH3P25336 YHR054W-AYHR054W-A 195 nt4.28□□□□□ -1.72
MSH3P25336 DFG10YIL049W 762 nt4.28□□□□□ -1.72
MSH3P25336 MCM22YJR135C 720 nt4.28□□□□□ -1.72
MSH3P25336 YOR121CYOR121C 306 nt4.28□□□□□ -1.72
MSH3P25336 POL4YCR014C 1749 nt4.28□□□□□ -1.72
MSH3P25336 AVT7YIL088C 1473 nt4.28□□□□□ -1.72
MSH3P25336 BFR1YOR198C 1413 nt4.28□□□□□ -1.72
MSH3P25336 PRM15YMR278W 1869 nt4.27□□□□□ -1.73
MSH3P25336 YDL152WYDL152W 366 nt4.27□□□□□ -1.73
MSH3P25336 YDR230WYDR230W 348 nt4.27□□□□□ -1.73
MSH3P25336 SDH7YDR511W 402 nt4.27□□□□□ -1.73
MSH3P25336 RPS8BYER102W 603 nt4.27□□□□□ -1.73
MSH3P25336 YER137W-AYER137W-A 306 nt4.27□□□□□ -1.73
MSH3P25336 UTP11YKL099C 753 nt4.27□□□□□ -1.73
MSH3P25336 ILV5YLR355C 1188 nt4.27□□□□□ -1.73
MSH3P25336 REB1YBR049C 2433 nt4.26□□□□□ -1.73
MSH3P25336 TMA17YDL110C 453 nt4.26□□□□□ -1.73
MSH3P25336 SNA4YDL123W 423 nt4.26□□□□□ -1.73
MSH3P25336 EMI1YDR512C 564 nt4.26□□□□□ -1.73
MSH3P25336 SMX2YFL017W-A 234 nt4.26□□□□□ -1.73
MSH3P25336 COX8YLR395C 237 nt4.26□□□□□ -1.73
MSH3P25336 VAC14YLR386W 2643 nt4.26□□□□□ -1.73
MSH3P25336 GCD10YNL062C 1437 nt4.26□□□□□ -1.73
MSH3P25336 YNR065CYNR065C 3351 nt4.26□□□□□ -1.73
MSH3P25336 PCK1YKR097W 1650 nt4.26□□□□□ -1.73
MSH3P25336 VIP1YLR410W 3441 nt4.25□□□□□ -1.73
MSH3P25336 TDA1YMR291W 1761 nt4.25□□□□□ -1.73
MSH3P25336 BEM4YPL161C 1902 nt4.25□□□□□ -1.73
MSH3P25336 YDR338CYDR338C 2088 nt4.25□□□□□ -1.73
MSH3P25336 PRP22YER013W 3438 nt4.25□□□□□ -1.73
MSH3P25336 HMRA2YCR096C 360 nt4.25□□□□□ -1.73
MSH3P25336 YDR194W-AYDR194W-A 153 nt4.25□□□□□ -1.73
MSH3P25336 TEN1YLR010C 483 nt4.25□□□□□ -1.73
MSH3P25336 YOR277CYOR277C 309 nt4.25□□□□□ -1.73
MSH3P25336 STP2YHR006W 1626 nt4.24□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 29.3 ms