Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.13■□□□□ 0.49
SRMP19623 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRMP19623 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SRMP19623 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.13■□□□□ 0.49
SRMP19623 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRMP19623 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRMP19623 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRMP19623 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SRMP19623 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRMP19623 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRMP19623 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRMP19623 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRMP19623 AC112907.3-201ENST00000577781 2400 ntBASIC18.12■□□□□ 0.49
SRMP19623 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRMP19623 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRMP19623 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.12■□□□□ 0.49
SRMP19623 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SRMP19623 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.12■□□□□ 0.49
SRMP19623 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.12■□□□□ 0.49
SRMP19623 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.12■□□□□ 0.49
SRMP19623 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRMP19623 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRMP19623 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRMP19623 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.12■□□□□ 0.49
SRMP19623 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRMP19623 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRMP19623 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRMP19623 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SRMP19623 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRMP19623 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.11■□□□□ 0.49
SRMP19623 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.11■□□□□ 0.49
SRMP19623 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.11■□□□□ 0.49
SRMP19623 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRMP19623 RNF165-205ENST00000588679 2904 ntBASIC18.11■□□□□ 0.49
SRMP19623 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SRMP19623 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRMP19623 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
SRMP19623 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.11■□□□□ 0.49
SRMP19623 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRMP19623 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRMP19623 AL512408.1-201ENST00000569378 2000 ntBASIC18.11■□□□□ 0.49
SRMP19623 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRMP19623 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRMP19623 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.1■□□□□ 0.49
SRMP19623 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.1■□□□□ 0.49
SRMP19623 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRMP19623 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.1■□□□□ 0.49
SRMP19623 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
SRMP19623 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.1■□□□□ 0.49
SRMP19623 FP700111.2-201ENST00000619190 1892 ntBASIC18.1■□□□□ 0.49
SRMP19623 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRMP19623 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRMP19623 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.1■□□□□ 0.49
SRMP19623 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.1■□□□□ 0.49
SRMP19623 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRMP19623 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRMP19623 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.1■□□□□ 0.49
SRMP19623 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.1■□□□□ 0.49
SRMP19623 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SRMP19623 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRMP19623 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRMP19623 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRMP19623 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRMP19623 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRMP19623 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRMP19623 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.1■□□□□ 0.49
SRMP19623 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SRMP19623 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRMP19623 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.09■□□□□ 0.49
SRMP19623 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRMP19623 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRMP19623 SYT6-210ENST00000641643 1587 ntBASIC18.09■□□□□ 0.49
SRMP19623 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRMP19623 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRMP19623 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRMP19623 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRMP19623 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRMP19623 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRMP19623 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.09■□□□□ 0.49
SRMP19623 SLC47A1P1-202ENST00000449666 945 ntBASIC18.09■□□□□ 0.49
SRMP19623 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.09■□□□□ 0.49
SRMP19623 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SRMP19623 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.09■□□□□ 0.49
SRMP19623 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SRMP19623 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRMP19623 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRMP19623 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SRMP19623 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRMP19623 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRMP19623 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SRMP19623 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.09■□□□□ 0.49
SRMP19623 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRMP19623 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRMP19623 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.08■□□□□ 0.49
SRMP19623 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SRMP19623 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SRMP19623 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.08■□□□□ 0.49
SRMP19623 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.08■□□□□ 0.49
SRMP19623 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SRMP19623 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms