Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.69■□□□□ 0.9
PRAMEF1O95521 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PRAMEF1O95521 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF1O95521 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.69■□□□□ 0.9
PRAMEF1O95521 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF1O95521 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF1O95521 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF1O95521 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF1O95521 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF1O95521 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF1O95521 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF1O95521 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
PRAMEF1O95521 MFSD11-216ENST00000590393 1141 ntBASIC20.69■□□□□ 0.9
PRAMEF1O95521 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF1O95521 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF1O95521 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PRAMEF1O95521 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.69■□□□□ 0.9
PRAMEF1O95521 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.69■□□□□ 0.9
PRAMEF1O95521 RBM17P2-201ENST00000616397 1405 ntBASIC20.69■□□□□ 0.9
PRAMEF1O95521 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF1O95521 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PRAMEF1O95521 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.68■□□□□ 0.9
PRAMEF1O95521 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF1O95521 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
PRAMEF1O95521 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.68■□□□□ 0.9
PRAMEF1O95521 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF1O95521 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.68■□□□□ 0.9
PRAMEF1O95521 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.68■□□□□ 0.9
PRAMEF1O95521 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.68■□□□□ 0.9
PRAMEF1O95521 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PRAMEF1O95521 AC010536.3-201ENST00000620306 533 ntBASIC20.68■□□□□ 0.9
PRAMEF1O95521 AC092437.1-201ENST00000624794 1048 ntBASIC20.68■□□□□ 0.9
PRAMEF1O95521 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF1O95521 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PRAMEF1O95521 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF1O95521 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.67■□□□□ 0.9
PRAMEF1O95521 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF1O95521 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF1O95521 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF1O95521 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.67■□□□□ 0.9
PRAMEF1O95521 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.67■□□□□ 0.9
PRAMEF1O95521 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.67■□□□□ 0.9
PRAMEF1O95521 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.67■□□□□ 0.9
PRAMEF1O95521 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF1O95521 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PRAMEF1O95521 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.67■□□□□ 0.9
PRAMEF1O95521 AC243732.1-201ENST00000612648 864 ntBASIC20.67■□□□□ 0.9
PRAMEF1O95521 BID-214ENST00000617586 542 ntTSL 5 BASIC20.67■□□□□ 0.9
PRAMEF1O95521 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF1O95521 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PRAMEF1O95521 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF1O95521 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.66■□□□□ 0.9
PRAMEF1O95521 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF1O95521 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF1O95521 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF1O95521 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.66■□□□□ 0.9
PRAMEF1O95521 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF1O95521 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF1O95521 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PRAMEF1O95521 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF1O95521 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF1O95521 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PRAMEF1O95521 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF1O95521 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.65■□□□□ 0.9
PRAMEF1O95521 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF1O95521 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.65■□□□□ 0.9
PRAMEF1O95521 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF1O95521 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PRAMEF1O95521 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.65■□□□□ 0.9
PRAMEF1O95521 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.65■□□□□ 0.9
PRAMEF1O95521 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF1O95521 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
PRAMEF1O95521 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PRAMEF1O95521 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF1O95521 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.65■□□□□ 0.9
PRAMEF1O95521 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF1O95521 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.65■□□□□ 0.9
PRAMEF1O95521 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.65■□□□□ 0.9
PRAMEF1O95521 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
PRAMEF1O95521 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.65■□□□□ 0.9
PRAMEF1O95521 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF1O95521 AL137784.2-201ENST00000607332 1000 ntBASIC20.65■□□□□ 0.9
PRAMEF1O95521 AC011767.1-201ENST00000617410 1153 ntBASIC20.65■□□□□ 0.9
PRAMEF1O95521 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.65■□□□□ 0.9
PRAMEF1O95521 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF1O95521 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF1O95521 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF1O95521 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF1O95521 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRAMEF1O95521 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
PRAMEF1O95521 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.64■□□□□ 0.9
PRAMEF1O95521 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.64■□□□□ 0.89
PRAMEF1O95521 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRAMEF1O95521 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRAMEF1O95521 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRAMEF1O95521 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.64■□□□□ 0.89
PRAMEF1O95521 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRAMEF1O95521 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.64■□□□□ 0.89
PRAMEF1O95521 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
PRAMEF1O95521 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms