Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.54■□□□□ 0.4
SIRPB1O00241 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.54■□□□□ 0.4
SIRPB1O00241 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIRPB1O00241 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIRPB1O00241 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.54■□□□□ 0.4
SIRPB1O00241 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SIRPB1O00241 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SIRPB1O00241 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SIRPB1O00241 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SIRPB1O00241 LINC02228-203ENST00000641970 1355 ntBASIC17.53■□□□□ 0.4
SIRPB1O00241 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SIRPB1O00241 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SIRPB1O00241 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SIRPB1O00241 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SIRPB1O00241 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.53■□□□□ 0.4
SIRPB1O00241 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.53■□□□□ 0.4
SIRPB1O00241 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SIRPB1O00241 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.53■□□□□ 0.4
SIRPB1O00241 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.53■□□□□ 0.4
SIRPB1O00241 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIRPB1O00241 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIRPB1O00241 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SIRPB1O00241 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SIRPB1O00241 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SIRPB1O00241 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SIRPB1O00241 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
SIRPB1O00241 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIRPB1O00241 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SIRPB1O00241 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIRPB1O00241 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIRPB1O00241 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SIRPB1O00241 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SIRPB1O00241 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.52■□□□□ 0.4
SIRPB1O00241 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SIRPB1O00241 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIRPB1O00241 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SIRPB1O00241 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.52■□□□□ 0.39
SIRPB1O00241 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SIRPB1O00241 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SIRPB1O00241 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SIRPB1O00241 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.52■□□□□ 0.39
SIRPB1O00241 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.51■□□□□ 0.39
SIRPB1O00241 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
SIRPB1O00241 AP004607.4-201ENST00000530158 1459 ntBASIC17.51■□□□□ 0.39
SIRPB1O00241 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SIRPB1O00241 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
SIRPB1O00241 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
SIRPB1O00241 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SIRPB1O00241 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SIRPB1O00241 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.51■□□□□ 0.39
SIRPB1O00241 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIRPB1O00241 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SIRPB1O00241 ZNRF2P3-201ENST00000424200 374 ntBASIC17.51■□□□□ 0.39
SIRPB1O00241 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIRPB1O00241 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIRPB1O00241 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.51■□□□□ 0.39
SIRPB1O00241 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.51■□□□□ 0.39
SIRPB1O00241 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.51■□□□□ 0.39
SIRPB1O00241 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.51■□□□□ 0.39
SIRPB1O00241 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.51■□□□□ 0.39
SIRPB1O00241 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.51■□□□□ 0.39
SIRPB1O00241 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SIRPB1O00241 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SIRPB1O00241 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIRPB1O00241 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SIRPB1O00241 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SIRPB1O00241 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.51■□□□□ 0.39
SIRPB1O00241 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIRPB1O00241 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SIRPB1O00241 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIRPB1O00241 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIRPB1O00241 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SIRPB1O00241 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIRPB1O00241 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIRPB1O00241 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.5■□□□□ 0.39
SIRPB1O00241 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIRPB1O00241 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.5■□□□□ 0.39
SIRPB1O00241 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.5■□□□□ 0.39
SIRPB1O00241 AC008175.2-201ENST00000612840 297 ntBASIC17.5■□□□□ 0.39
SIRPB1O00241 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIRPB1O00241 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIRPB1O00241 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SIRPB1O00241 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SIRPB1O00241 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.49■□□□□ 0.39
SIRPB1O00241 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIRPB1O00241 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIRPB1O00241 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SIRPB1O00241 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIRPB1O00241 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SIRPB1O00241 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIRPB1O00241 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.49■□□□□ 0.39
SIRPB1O00241 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIRPB1O00241 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SIRPB1O00241 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.49■□□□□ 0.39
SIRPB1O00241 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIRPB1O00241 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.49■□□□□ 0.39
SIRPB1O00241 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIRPB1O00241 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.49■□□□□ 0.39
SIRPB1O00241 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIRPB1O00241 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms