Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV30A0A087WSZ9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRAV30A0A087WSZ9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 AF213884.3-201ENST00000563833 479 ntBASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 AL354811.1-201ENST00000610286 706 ntBASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV30A0A087WSZ9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TRAV30A0A087WSZ9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV30A0A087WSZ9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.27■□□□□ 0.19
TRAV30A0A087WSZ9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TRAV30A0A087WSZ9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV30A0A087WSZ9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.27■□□□□ 0.19
TRAV30A0A087WSZ9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV30A0A087WSZ9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
TRAV30A0A087WSZ9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
TRAV30A0A087WSZ9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.27■□□□□ 0.19
TRAV30A0A087WSZ9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.27■□□□□ 0.19
TRAV30A0A087WSZ9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
TRAV30A0A087WSZ9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TRAV30A0A087WSZ9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 AC012414.1-201ENST00000556676 535 ntBASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 AC053503.5-201ENST00000601508 636 ntBASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 AC110285.6-201ENST00000617652 491 ntBASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 AC006128.1-201ENST00000624704 1661 ntBASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV30A0A087WSZ9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV30A0A087WSZ9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms