Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPH3AQ9Y2J0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.07■□□□□ 0.64
RPH3AQ9Y2J0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RPH3AQ9Y2J0 AC120498.10-201ENST00000621827 505 ntBASIC19.07■□□□□ 0.64
RPH3AQ9Y2J0 MYCNOS-205ENST00000641950 531 ntBASIC19.07■□□□□ 0.64
RPH3AQ9Y2J0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.07■□□□□ 0.64
RPH3AQ9Y2J0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPH3AQ9Y2J0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPH3AQ9Y2J0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.07■□□□□ 0.64
RPH3AQ9Y2J0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RPH3AQ9Y2J0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 AC080038.1-201ENST00000611274 1154 ntBASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.06■□□□□ 0.64
RPH3AQ9Y2J0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPH3AQ9Y2J0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPH3AQ9Y2J0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RPH3AQ9Y2J0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.05■□□□□ 0.64
RPH3AQ9Y2J0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPH3AQ9Y2J0 POU5F1P4-201ENST00000413175 1085 ntBASIC19.05■□□□□ 0.64
RPH3AQ9Y2J0 KRT18P20-201ENST00000548986 1279 ntBASIC19.05■□□□□ 0.64
RPH3AQ9Y2J0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.05■□□□□ 0.64
RPH3AQ9Y2J0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.05■□□□□ 0.64
RPH3AQ9Y2J0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.05■□□□□ 0.64
RPH3AQ9Y2J0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPH3AQ9Y2J0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.05■□□□□ 0.64
RPH3AQ9Y2J0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPH3AQ9Y2J0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPH3AQ9Y2J0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPH3AQ9Y2J0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPH3AQ9Y2J0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.05■□□□□ 0.64
RPH3AQ9Y2J0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.04■□□□□ 0.64
RPH3AQ9Y2J0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RPH3AQ9Y2J0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RPH3AQ9Y2J0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPH3AQ9Y2J0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.04■□□□□ 0.64
RPH3AQ9Y2J0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.04■□□□□ 0.64
RPH3AQ9Y2J0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.04■□□□□ 0.64
RPH3AQ9Y2J0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPH3AQ9Y2J0 MFSD11-216ENST00000590393 1141 ntBASIC19.04■□□□□ 0.64
RPH3AQ9Y2J0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RPH3AQ9Y2J0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPH3AQ9Y2J0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.04■□□□□ 0.64
RPH3AQ9Y2J0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.04■□□□□ 0.64
RPH3AQ9Y2J0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPH3AQ9Y2J0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPH3AQ9Y2J0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPH3AQ9Y2J0 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.04■□□□□ 0.64
RPH3AQ9Y2J0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPH3AQ9Y2J0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPH3AQ9Y2J0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.04■□□□□ 0.64
RPH3AQ9Y2J0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPH3AQ9Y2J0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPH3AQ9Y2J0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPH3AQ9Y2J0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPH3AQ9Y2J0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPH3AQ9Y2J0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPH3AQ9Y2J0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms