Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CDK11AQ9UQ88 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
CDK11AQ9UQ88 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC32.4■■■□□ 2.78
CDK11AQ9UQ88 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC32.4■■■□□ 2.78
CDK11AQ9UQ88 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CDK11AQ9UQ88 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC32.4■■■□□ 2.78
CDK11AQ9UQ88 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
CDK11AQ9UQ88 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CDK11AQ9UQ88 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC32.4■■■□□ 2.78
CDK11AQ9UQ88 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CDK11AQ9UQ88 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
CDK11AQ9UQ88 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
CDK11AQ9UQ88 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CDK11AQ9UQ88 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
CDK11AQ9UQ88 KRT17P3-201ENST00000420566 1262 ntBASIC32.39■■■□□ 2.78
CDK11AQ9UQ88 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.78
CDK11AQ9UQ88 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC32.39■■■□□ 2.78
CDK11AQ9UQ88 STX5-203ENST00000394690 1568 ntTSL 5 BASIC32.39■■■□□ 2.78
CDK11AQ9UQ88 AC010542.4-201ENST00000563151 1910 ntBASIC32.39■■■□□ 2.78
CDK11AQ9UQ88 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CDK11AQ9UQ88 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CDK11AQ9UQ88 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC32.39■■■□□ 2.78
CDK11AQ9UQ88 AC068473.5-201ENST00000616428 2072 ntBASIC32.38■■■□□ 2.77
CDK11AQ9UQ88 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC32.38■■■□□ 2.77
CDK11AQ9UQ88 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
CDK11AQ9UQ88 NXN-202ENST00000537628 1340 ntTSL 3 BASIC32.38■■■□□ 2.77
CDK11AQ9UQ88 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
CDK11AQ9UQ88 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CDK11AQ9UQ88 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
CDK11AQ9UQ88 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC32.38■■■□□ 2.77
CDK11AQ9UQ88 HES2-205ENST00000487437 968 ntTSL 3 BASIC32.38■■■□□ 2.77
CDK11AQ9UQ88 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC32.38■■■□□ 2.77
CDK11AQ9UQ88 AC080038.3-201ENST00000623346 1952 ntBASIC32.38■■■□□ 2.77
CDK11AQ9UQ88 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC32.37■■■□□ 2.77
CDK11AQ9UQ88 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC32.37■■■□□ 2.77
CDK11AQ9UQ88 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CDK11AQ9UQ88 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC32.37■■■□□ 2.77
CDK11AQ9UQ88 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC32.37■■■□□ 2.77
CDK11AQ9UQ88 RPPH1-201ENST00000516869 333 ntBASIC32.37■■■□□ 2.77
CDK11AQ9UQ88 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC32.37■■■□□ 2.77
CDK11AQ9UQ88 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC32.37■■■□□ 2.77
CDK11AQ9UQ88 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CDK11AQ9UQ88 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CDK11AQ9UQ88 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC32.36■■■□□ 2.77
CDK11AQ9UQ88 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
CDK11AQ9UQ88 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
CDK11AQ9UQ88 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CDK11AQ9UQ88 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC32.36■■■□□ 2.77
CDK11AQ9UQ88 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC32.36■■■□□ 2.77
CDK11AQ9UQ88 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CDK11AQ9UQ88 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CDK11AQ9UQ88 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC32.35■■■□□ 2.77
CDK11AQ9UQ88 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC32.35■■■□□ 2.77
CDK11AQ9UQ88 MIR718-201ENST00000390190 70 ntBASIC32.35■■■□□ 2.77
CDK11AQ9UQ88 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
CDK11AQ9UQ88 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC32.35■■■□□ 2.77
CDK11AQ9UQ88 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
CDK11AQ9UQ88 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC32.35■■■□□ 2.77
CDK11AQ9UQ88 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC32.35■■■□□ 2.77
CDK11AQ9UQ88 CYP21A1P-202ENST00000354927 1481 ntBASIC32.35■■■□□ 2.77
CDK11AQ9UQ88 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CDK11AQ9UQ88 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC32.34■■■□□ 2.77
CDK11AQ9UQ88 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC32.34■■■□□ 2.77
CDK11AQ9UQ88 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC32.34■■■□□ 2.77
CDK11AQ9UQ88 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CDK11AQ9UQ88 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC32.34■■■□□ 2.77
CDK11AQ9UQ88 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CDK11AQ9UQ88 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CDK11AQ9UQ88 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CDK11AQ9UQ88 MFF-205ENST00000354503 1085 ntTSL 2 BASIC32.34■■■□□ 2.77
CDK11AQ9UQ88 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CDK11AQ9UQ88 RN7SL471P-201ENST00000580476 299 ntBASIC32.34■■■□□ 2.77
CDK11AQ9UQ88 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CDK11AQ9UQ88 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC32.33■■■□□ 2.77
CDK11AQ9UQ88 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CDK11AQ9UQ88 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
CDK11AQ9UQ88 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC32.33■■■□□ 2.77
CDK11AQ9UQ88 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CDK11AQ9UQ88 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CDK11AQ9UQ88 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC32.33■■■□□ 2.77
CDK11AQ9UQ88 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC32.33■■■□□ 2.77
CDK11AQ9UQ88 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC32.33■■■□□ 2.77
CDK11AQ9UQ88 OR2A1-AS1-207ENST00000486094 819 ntBASIC32.33■■■□□ 2.77
CDK11AQ9UQ88 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CDK11AQ9UQ88 C1QBPP2-201ENST00000528754 825 ntBASIC32.33■■■□□ 2.77
CDK11AQ9UQ88 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC32.33■■■□□ 2.77
CDK11AQ9UQ88 FAM197Y4-202ENST00000622692 608 ntBASIC32.33■■■□□ 2.77
CDK11AQ9UQ88 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC32.33■■■□□ 2.77
CDK11AQ9UQ88 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC32.33■■■□□ 2.77
CDK11AQ9UQ88 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC32.32■■■□□ 2.76
CDK11AQ9UQ88 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CDK11AQ9UQ88 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CDK11AQ9UQ88 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC32.32■■■□□ 2.76
CDK11AQ9UQ88 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.76
CDK11AQ9UQ88 SLC29A4P2-201ENST00000504749 1089 ntBASIC32.32■■■□□ 2.76
CDK11AQ9UQ88 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC32.32■■■□□ 2.76
CDK11AQ9UQ88 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC32.32■■■□□ 2.76
CDK11AQ9UQ88 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CDK11AQ9UQ88 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CDK11AQ9UQ88 CRK-204ENST00000574295 1391 ntTSL 5 BASIC32.32■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms