Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RTFDC1Q9BY42 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
RTFDC1Q9BY42 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC25.53■■□□□ 1.68
RTFDC1Q9BY42 SLC29A4P2-201ENST00000504749 1089 ntBASIC25.53■■□□□ 1.68
RTFDC1Q9BY42 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC25.53■■□□□ 1.68
RTFDC1Q9BY42 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
RTFDC1Q9BY42 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RTFDC1Q9BY42 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RTFDC1Q9BY42 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.53■■□□□ 1.68
RTFDC1Q9BY42 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RTFDC1Q9BY42 C9orf163-202ENST00000624034 2573 ntBASIC25.52■■□□□ 1.68
RTFDC1Q9BY42 AC092368.3-202ENST00000574180 1591 ntBASIC25.52■■□□□ 1.68
RTFDC1Q9BY42 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.52■■□□□ 1.68
RTFDC1Q9BY42 C1orf229-201ENST00000623686 2258 ntBASIC25.52■■□□□ 1.68
RTFDC1Q9BY42 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC25.52■■□□□ 1.68
RTFDC1Q9BY42 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RTFDC1Q9BY42 KRT17P3-201ENST00000420566 1262 ntBASIC25.52■■□□□ 1.68
RTFDC1Q9BY42 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC25.52■■□□□ 1.68
RTFDC1Q9BY42 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC25.52■■□□□ 1.68
RTFDC1Q9BY42 C1QBPP2-201ENST00000528754 825 ntBASIC25.52■■□□□ 1.68
RTFDC1Q9BY42 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC25.52■■□□□ 1.68
RTFDC1Q9BY42 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC25.52■■□□□ 1.68
RTFDC1Q9BY42 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTFDC1Q9BY42 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
RTFDC1Q9BY42 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTFDC1Q9BY42 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.51■■□□□ 1.67
RTFDC1Q9BY42 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RTFDC1Q9BY42 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC25.51■■□□□ 1.67
RTFDC1Q9BY42 AC233263.1-201ENST00000578059 224 ntBASIC25.51■■□□□ 1.67
RTFDC1Q9BY42 Z99916.2-201ENST00000604037 246 ntBASIC25.51■■□□□ 1.67
RTFDC1Q9BY42 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RTFDC1Q9BY42 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
RTFDC1Q9BY42 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.51■■□□□ 1.67
RTFDC1Q9BY42 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.51■■□□□ 1.67
RTFDC1Q9BY42 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC25.5■■□□□ 1.67
RTFDC1Q9BY42 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RTFDC1Q9BY42 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RTFDC1Q9BY42 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC25.5■■□□□ 1.67
RTFDC1Q9BY42 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RTFDC1Q9BY42 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC25.5■■□□□ 1.67
RTFDC1Q9BY42 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RTFDC1Q9BY42 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC25.5■■□□□ 1.67
RTFDC1Q9BY42 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC25.5■■□□□ 1.67
RTFDC1Q9BY42 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTFDC1Q9BY42 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RTFDC1Q9BY42 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RTFDC1Q9BY42 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.49■■□□□ 1.67
RTFDC1Q9BY42 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTFDC1Q9BY42 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTFDC1Q9BY42 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC25.49■■□□□ 1.67
RTFDC1Q9BY42 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC25.49■■□□□ 1.67
RTFDC1Q9BY42 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC25.49■■□□□ 1.67
RTFDC1Q9BY42 FAM197Y4-202ENST00000622692 608 ntBASIC25.49■■□□□ 1.67
RTFDC1Q9BY42 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTFDC1Q9BY42 AC080038.3-201ENST00000623346 1952 ntBASIC25.49■■□□□ 1.67
RTFDC1Q9BY42 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
RTFDC1Q9BY42 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RTFDC1Q9BY42 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
RTFDC1Q9BY42 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RTFDC1Q9BY42 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
RTFDC1Q9BY42 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RTFDC1Q9BY42 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTFDC1Q9BY42 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTFDC1Q9BY42 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTFDC1Q9BY42 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC25.48■■□□□ 1.67
RTFDC1Q9BY42 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC25.48■■□□□ 1.67
RTFDC1Q9BY42 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
RTFDC1Q9BY42 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
RTFDC1Q9BY42 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RTFDC1Q9BY42 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
RTFDC1Q9BY42 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RTFDC1Q9BY42 C11orf96-202ENST00000528572 1834 ntBASIC25.47■■□□□ 1.67
RTFDC1Q9BY42 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
RTFDC1Q9BY42 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.47■■□□□ 1.67
RTFDC1Q9BY42 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC25.47■■□□□ 1.67
RTFDC1Q9BY42 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
RTFDC1Q9BY42 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC25.47■■□□□ 1.67
RTFDC1Q9BY42 AC069544.1-201ENST00000609399 999 ntBASIC25.47■■□□□ 1.67
RTFDC1Q9BY42 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.47■■□□□ 1.67
RTFDC1Q9BY42 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
RTFDC1Q9BY42 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RTFDC1Q9BY42 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
RTFDC1Q9BY42 AC127496.7-201ENST00000625110 1798 ntBASIC25.46■■□□□ 1.67
RTFDC1Q9BY42 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC25.46■■□□□ 1.67
RTFDC1Q9BY42 MFF-205ENST00000354503 1085 ntTSL 2 BASIC25.46■■□□□ 1.67
RTFDC1Q9BY42 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RTFDC1Q9BY42 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RTFDC1Q9BY42 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
RTFDC1Q9BY42 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RTFDC1Q9BY42 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC25.46■■□□□ 1.67
RTFDC1Q9BY42 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC25.46■■□□□ 1.67
RTFDC1Q9BY42 SOX15-203ENST00000570788 1093 ntBASIC25.46■■□□□ 1.67
RTFDC1Q9BY42 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC25.46■■□□□ 1.67
RTFDC1Q9BY42 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC25.46■■□□□ 1.67
RTFDC1Q9BY42 AC073912.3-201ENST00000624414 853 ntBASIC25.46■■□□□ 1.67
RTFDC1Q9BY42 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RTFDC1Q9BY42 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC25.46■■□□□ 1.67
RTFDC1Q9BY42 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
RTFDC1Q9BY42 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
RTFDC1Q9BY42 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms