Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SCAF11Q99590 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SCAF11Q99590 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SCAF11Q99590 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
SCAF11Q99590 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC30.17■■■□□ 2.42
SCAF11Q99590 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC30.17■■■□□ 2.42
SCAF11Q99590 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SCAF11Q99590 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC30.16■■■□□ 2.42
SCAF11Q99590 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SCAF11Q99590 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SCAF11Q99590 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
SCAF11Q99590 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SCAF11Q99590 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SCAF11Q99590 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SCAF11Q99590 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
SCAF11Q99590 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC30.16■■■□□ 2.42
SCAF11Q99590 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SCAF11Q99590 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SCAF11Q99590 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC30.16■■■□□ 2.42
SCAF11Q99590 SOX15-203ENST00000570788 1093 ntBASIC30.16■■■□□ 2.42
SCAF11Q99590 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SCAF11Q99590 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
SCAF11Q99590 C1orf229-201ENST00000623686 2258 ntBASIC30.16■■■□□ 2.42
SCAF11Q99590 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
SCAF11Q99590 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SCAF11Q99590 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC30.16■■■□□ 2.42
SCAF11Q99590 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SCAF11Q99590 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
SCAF11Q99590 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
SCAF11Q99590 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SCAF11Q99590 AC091799.1-201ENST00000422823 811 ntBASIC30.15■■■□□ 2.42
SCAF11Q99590 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC30.15■■■□□ 2.42
SCAF11Q99590 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC30.15■■■□□ 2.42
SCAF11Q99590 KLF2-202ENST00000592003 564 ntTSL 3 BASIC30.15■■■□□ 2.42
SCAF11Q99590 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC30.15■■■□□ 2.42
SCAF11Q99590 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC30.15■■■□□ 2.42
SCAF11Q99590 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
SCAF11Q99590 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC30.14■■■□□ 2.42
SCAF11Q99590 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC30.14■■■□□ 2.42
SCAF11Q99590 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC30.14■■■□□ 2.42
SCAF11Q99590 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SCAF11Q99590 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC30.14■■■□□ 2.42
SCAF11Q99590 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
SCAF11Q99590 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.42
SCAF11Q99590 ME2-208ENST00000638937 2471 ntTSL 5 BASIC30.14■■■□□ 2.42
SCAF11Q99590 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.41
SCAF11Q99590 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SCAF11Q99590 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SCAF11Q99590 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
SCAF11Q99590 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC30.13■■■□□ 2.41
SCAF11Q99590 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SCAF11Q99590 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SCAF11Q99590 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SCAF11Q99590 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC30.13■■■□□ 2.41
SCAF11Q99590 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC30.13■■■□□ 2.41
SCAF11Q99590 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC30.13■■■□□ 2.41
SCAF11Q99590 AC233702.5-201ENST00000584107 538 ntBASIC30.13■■■□□ 2.41
SCAF11Q99590 RARG-204ENST00000543726 1779 ntTSL 2 BASIC30.13■■■□□ 2.41
SCAF11Q99590 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC30.13■■■□□ 2.41
SCAF11Q99590 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC30.13■■■□□ 2.41
SCAF11Q99590 C9orf163-202ENST00000624034 2573 ntBASIC30.13■■■□□ 2.41
SCAF11Q99590 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC30.13■■■□□ 2.41
SCAF11Q99590 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC30.12■■■□□ 2.41
SCAF11Q99590 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SCAF11Q99590 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC30.12■■■□□ 2.41
SCAF11Q99590 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC30.12■■■□□ 2.41
SCAF11Q99590 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SCAF11Q99590 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SCAF11Q99590 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC30.12■■■□□ 2.41
SCAF11Q99590 REXO2-216ENST00000544196 452 ntTSL 3 BASIC30.12■■■□□ 2.41
SCAF11Q99590 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC30.12■■■□□ 2.41
SCAF11Q99590 AL589743.5-201ENST00000616611 1050 ntBASIC30.12■■■□□ 2.41
SCAF11Q99590 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SCAF11Q99590 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
SCAF11Q99590 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SCAF11Q99590 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SCAF11Q99590 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SCAF11Q99590 ABHD17AP6-201ENST00000458502 1044 ntBASIC30.12■■■□□ 2.41
SCAF11Q99590 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
SCAF11Q99590 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC30.12■■■□□ 2.41
SCAF11Q99590 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SCAF11Q99590 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
SCAF11Q99590 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC30.11■■■□□ 2.41
SCAF11Q99590 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
SCAF11Q99590 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
SCAF11Q99590 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SCAF11Q99590 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
SCAF11Q99590 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
SCAF11Q99590 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC30.11■■■□□ 2.41
SCAF11Q99590 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC30.11■■■□□ 2.41
SCAF11Q99590 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
SCAF11Q99590 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC30.11■■■□□ 2.41
SCAF11Q99590 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC30.11■■■□□ 2.41
SCAF11Q99590 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC30.11■■■□□ 2.41
SCAF11Q99590 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SCAF11Q99590 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SCAF11Q99590 AC080038.3-201ENST00000623346 1952 ntBASIC30.1■■■□□ 2.41
SCAF11Q99590 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SCAF11Q99590 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC30.1■■■□□ 2.41
SCAF11Q99590 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms