Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 AP003071.4-201ENST00000562276 1284 ntBASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.88■□□□□ 0.45
CSMD1Q96PZ7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD1Q96PZ7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.87■□□□□ 0.45
CSMD1Q96PZ7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD1Q96PZ7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.87■□□□□ 0.45
CSMD1Q96PZ7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD1Q96PZ7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD1Q96PZ7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.87■□□□□ 0.45
CSMD1Q96PZ7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.87■□□□□ 0.45
CSMD1Q96PZ7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.87■□□□□ 0.45
CSMD1Q96PZ7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.87■□□□□ 0.45
CSMD1Q96PZ7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD1Q96PZ7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CSMD1Q96PZ7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD1Q96PZ7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.87■□□□□ 0.45
CSMD1Q96PZ7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.87■□□□□ 0.45
CSMD1Q96PZ7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.87■□□□□ 0.45
CSMD1Q96PZ7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD1Q96PZ7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CSMD1Q96PZ7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CSMD1Q96PZ7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
CSMD1Q96PZ7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSMD1Q96PZ7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSMD1Q96PZ7 POM121L13P-201ENST00000422362 380 ntBASIC17.86■□□□□ 0.45
CSMD1Q96PZ7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.86■□□□□ 0.45
CSMD1Q96PZ7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSMD1Q96PZ7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CSMD1Q96PZ7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSMD1Q96PZ7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CSMD1Q96PZ7 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.86■□□□□ 0.45
CSMD1Q96PZ7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CSMD1Q96PZ7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CSMD1Q96PZ7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 AL023875.1-201ENST00000640777 796 ntBASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 LSM12P1-201ENST00000411836 588 ntBASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
CSMD1Q96PZ7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 AL135905.2-201ENST00000584934 1404 ntBASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 AP004607.7-201ENST00000527152 1677 ntBASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 AP001412.1-201ENST00000608405 714 ntBASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 AL591742.1-201ENST00000604433 565 ntBASIC17.84■□□□□ 0.45
CSMD1Q96PZ7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms