Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF48Q96MX3 KRT16P2-201ENST00000414673 1423 ntBASIC16.96■□□□□ 0.31
ZNF48Q96MX3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF48Q96MX3 RBM17P2-201ENST00000616397 1405 ntBASIC16.96■□□□□ 0.31
ZNF48Q96MX3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF48Q96MX3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF48Q96MX3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF48Q96MX3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.96■□□□□ 0.31
ZNF48Q96MX3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.96■□□□□ 0.31
ZNF48Q96MX3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF48Q96MX3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.96■□□□□ 0.31
ZNF48Q96MX3 RNA5SP413-201ENST00000516373 109 ntBASIC16.96■□□□□ 0.31
ZNF48Q96MX3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.96■□□□□ 0.31
ZNF48Q96MX3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.96■□□□□ 0.31
ZNF48Q96MX3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.96■□□□□ 0.31
ZNF48Q96MX3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.96■□□□□ 0.31
ZNF48Q96MX3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF48Q96MX3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF48Q96MX3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.96■□□□□ 0.31
ZNF48Q96MX3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF48Q96MX3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF48Q96MX3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZNF48Q96MX3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.96■□□□□ 0.3
ZNF48Q96MX3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
ZNF48Q96MX3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ZNF48Q96MX3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
ZNF48Q96MX3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ZNF48Q96MX3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ZNF48Q96MX3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ZNF48Q96MX3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
ZNF48Q96MX3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF48Q96MX3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
ZNF48Q96MX3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.95■□□□□ 0.3
ZNF48Q96MX3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF48Q96MX3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF48Q96MX3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF48Q96MX3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF48Q96MX3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF48Q96MX3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.95■□□□□ 0.3
ZNF48Q96MX3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF48Q96MX3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF48Q96MX3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF48Q96MX3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.95■□□□□ 0.3
ZNF48Q96MX3 BX276092.2-201ENST00000417668 665 ntBASIC16.95■□□□□ 0.3
ZNF48Q96MX3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.95■□□□□ 0.3
ZNF48Q96MX3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF48Q96MX3 AC092118.2-201ENST00000613495 667 ntBASIC16.95■□□□□ 0.3
ZNF48Q96MX3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF48Q96MX3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ZNF48Q96MX3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ZNF48Q96MX3 AC003102.1-202ENST00000563394 1796 ntBASIC16.94■□□□□ 0.3
ZNF48Q96MX3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ZNF48Q96MX3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 POU5F1P3-201ENST00000428824 1078 ntBASIC16.93■□□□□ 0.3
ZNF48Q96MX3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ZNF48Q96MX3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms