Protein–RNA interactions for Protein: Q91WM3

Rrp9, U3 small nucleolar RNA-interacting protein 2, mousemouse

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp9Q91WM3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rrp9Q91WM3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rrp9Q91WM3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rrp9Q91WM3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rrp9Q91WM3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rrp9Q91WM3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Rrp9Q91WM3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rrp9Q91WM3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rrp9Q91WM3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.1■□□□□ 0.81
Rrp9Q91WM3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rrp9Q91WM3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rrp9Q91WM3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.1■□□□□ 0.81
Rrp9Q91WM3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rrp9Q91WM3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Rrp9Q91WM3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rrp9Q91WM3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rrp9Q91WM3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rrp9Q91WM3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Rrp9Q91WM3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rrp9Q91WM3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rrp9Q91WM3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rrp9Q91WM3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rrp9Q91WM3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rrp9Q91WM3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rrp9Q91WM3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rrp9Q91WM3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Rrp9Q91WM3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rrp9Q91WM3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rrp9Q91WM3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rrp9Q91WM3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Rrp9Q91WM3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rrp9Q91WM3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rrp9Q91WM3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC20.08■□□□□ 0.81
Rrp9Q91WM3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rrp9Q91WM3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rrp9Q91WM3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Rrp9Q91WM3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rrp9Q91WM3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rrp9Q91WM3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rrp9Q91WM3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Rrp9Q91WM3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rrp9Q91WM3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rrp9Q91WM3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rrp9Q91WM3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rrp9Q91WM3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rrp9Q91WM3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rrp9Q91WM3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rrp9Q91WM3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rrp9Q91WM3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rrp9Q91WM3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Rrp9Q91WM3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rrp9Q91WM3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rrp9Q91WM3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rrp9Q91WM3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Rrp9Q91WM3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rrp9Q91WM3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rrp9Q91WM3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rrp9Q91WM3 Gm24970-201ENSMUST00000175582 82 ntBASIC20.07■□□□□ 0.8
Rrp9Q91WM3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rrp9Q91WM3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC20.07■□□□□ 0.8
Rrp9Q91WM3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rrp9Q91WM3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.07■□□□□ 0.8
Rrp9Q91WM3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rrp9Q91WM3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rrp9Q91WM3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rrp9Q91WM3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rrp9Q91WM3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rrp9Q91WM3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rrp9Q91WM3 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.06■□□□□ 0.8
Rrp9Q91WM3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rrp9Q91WM3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.06■□□□□ 0.8
Rrp9Q91WM3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rrp9Q91WM3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rrp9Q91WM3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rrp9Q91WM3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rrp9Q91WM3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rrp9Q91WM3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rrp9Q91WM3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rrp9Q91WM3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rrp9Q91WM3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rrp9Q91WM3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rrp9Q91WM3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rrp9Q91WM3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Rrp9Q91WM3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rrp9Q91WM3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rrp9Q91WM3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rrp9Q91WM3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Rrp9Q91WM3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC20.05■□□□□ 0.8
Rrp9Q91WM3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rrp9Q91WM3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rrp9Q91WM3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rrp9Q91WM3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rrp9Q91WM3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rrp9Q91WM3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Rrp9Q91WM3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rrp9Q91WM3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rrp9Q91WM3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rrp9Q91WM3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rrp9Q91WM3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rrp9Q91WM3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms