Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.73■□□□□ 0.59
SNX33Q8WV41 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX33Q8WV41 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNX33Q8WV41 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.73■□□□□ 0.59
SNX33Q8WV41 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
SNX33Q8WV41 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
SNX33Q8WV41 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX33Q8WV41 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNX33Q8WV41 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SNX33Q8WV41 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNX33Q8WV41 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX33Q8WV41 ZNRF2P3-201ENST00000424200 374 ntBASIC18.73■□□□□ 0.59
SNX33Q8WV41 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.73■□□□□ 0.59
SNX33Q8WV41 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.73■□□□□ 0.59
SNX33Q8WV41 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.73■□□□□ 0.59
SNX33Q8WV41 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX33Q8WV41 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.73■□□□□ 0.59
SNX33Q8WV41 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.73■□□□□ 0.59
SNX33Q8WV41 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SNX33Q8WV41 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX33Q8WV41 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SNX33Q8WV41 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX33Q8WV41 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNX33Q8WV41 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNX33Q8WV41 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNX33Q8WV41 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNX33Q8WV41 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.72■□□□□ 0.59
SNX33Q8WV41 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNX33Q8WV41 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX33Q8WV41 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX33Q8WV41 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX33Q8WV41 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.72■□□□□ 0.59
SNX33Q8WV41 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX33Q8WV41 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNX33Q8WV41 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX33Q8WV41 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX33Q8WV41 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.71■□□□□ 0.59
SNX33Q8WV41 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNX33Q8WV41 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.71■□□□□ 0.59
SNX33Q8WV41 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.71■□□□□ 0.59
SNX33Q8WV41 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.71■□□□□ 0.59
SNX33Q8WV41 FEM1AP1-201ENST00000431297 1995 ntBASIC18.71■□□□□ 0.59
SNX33Q8WV41 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX33Q8WV41 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SNX33Q8WV41 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SNX33Q8WV41 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNX33Q8WV41 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SNX33Q8WV41 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNX33Q8WV41 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNX33Q8WV41 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX33Q8WV41 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX33Q8WV41 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX33Q8WV41 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX33Q8WV41 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX33Q8WV41 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX33Q8WV41 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX33Q8WV41 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.7■□□□□ 0.58
SNX33Q8WV41 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX33Q8WV41 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.7■□□□□ 0.58
SNX33Q8WV41 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX33Q8WV41 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SNX33Q8WV41 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX33Q8WV41 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.7■□□□□ 0.58
SNX33Q8WV41 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX33Q8WV41 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX33Q8WV41 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX33Q8WV41 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX33Q8WV41 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX33Q8WV41 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX33Q8WV41 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SNX33Q8WV41 MIR935-201ENST00000401179 91 ntBASIC18.69■□□□□ 0.58
SNX33Q8WV41 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SNX33Q8WV41 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX33Q8WV41 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX33Q8WV41 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX33Q8WV41 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX33Q8WV41 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SNX33Q8WV41 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX33Q8WV41 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SNX33Q8WV41 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX33Q8WV41 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX33Q8WV41 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.68■□□□□ 0.58
SNX33Q8WV41 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX33Q8WV41 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX33Q8WV41 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SNX33Q8WV41 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX33Q8WV41 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX33Q8WV41 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX33Q8WV41 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.68■□□□□ 0.58
SNX33Q8WV41 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.68■□□□□ 0.58
SNX33Q8WV41 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.68■□□□□ 0.58
SNX33Q8WV41 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX33Q8WV41 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.68■□□□□ 0.58
SNX33Q8WV41 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX33Q8WV41 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX33Q8WV41 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX33Q8WV41 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX33Q8WV41 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX33Q8WV41 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX33Q8WV41 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms