Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC4A11Q8NBS3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC4A11Q8NBS3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
SLC4A11Q8NBS3 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.16■■□□□ 1.14
SLC4A11Q8NBS3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC4A11Q8NBS3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC4A11Q8NBS3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.16■■□□□ 1.14
SLC4A11Q8NBS3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SLC4A11Q8NBS3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC4A11Q8NBS3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.16■■□□□ 1.14
SLC4A11Q8NBS3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.16■■□□□ 1.14
SLC4A11Q8NBS3 DUX4L16-201ENST00000555130 1264 ntBASIC22.16■■□□□ 1.14
SLC4A11Q8NBS3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SLC4A11Q8NBS3 AC243732.1-201ENST00000612648 864 ntBASIC22.16■■□□□ 1.14
SLC4A11Q8NBS3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.16■■□□□ 1.14
SLC4A11Q8NBS3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC4A11Q8NBS3 AL137060.1-201ENST00000618151 2648 ntBASIC22.16■■□□□ 1.14
SLC4A11Q8NBS3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SLC4A11Q8NBS3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
SLC4A11Q8NBS3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC4A11Q8NBS3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.15■■□□□ 1.14
SLC4A11Q8NBS3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC4A11Q8NBS3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.15■■□□□ 1.14
SLC4A11Q8NBS3 AC245052.3-201ENST00000450182 901 ntBASIC22.15■■□□□ 1.14
SLC4A11Q8NBS3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.15■■□□□ 1.14
SLC4A11Q8NBS3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.15■■□□□ 1.14
SLC4A11Q8NBS3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.15■■□□□ 1.14
SLC4A11Q8NBS3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
SLC4A11Q8NBS3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.15■■□□□ 1.14
SLC4A11Q8NBS3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC4A11Q8NBS3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC4A11Q8NBS3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
SLC4A11Q8NBS3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SLC4A11Q8NBS3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SLC4A11Q8NBS3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SLC4A11Q8NBS3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SLC4A11Q8NBS3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.14■■□□□ 1.14
SLC4A11Q8NBS3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
SLC4A11Q8NBS3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SLC4A11Q8NBS3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC4A11Q8NBS3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC4A11Q8NBS3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.14■■□□□ 1.13
SLC4A11Q8NBS3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.14■■□□□ 1.13
SLC4A11Q8NBS3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.14■■□□□ 1.13
SLC4A11Q8NBS3 TERF1P5-201ENST00000477545 1207 ntBASIC22.14■■□□□ 1.13
SLC4A11Q8NBS3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
SLC4A11Q8NBS3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
SLC4A11Q8NBS3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SLC4A11Q8NBS3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SLC4A11Q8NBS3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC4A11Q8NBS3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.13■■□□□ 1.13
SLC4A11Q8NBS3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC4A11Q8NBS3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC4A11Q8NBS3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SLC4A11Q8NBS3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
SLC4A11Q8NBS3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SLC4A11Q8NBS3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.13■■□□□ 1.13
SLC4A11Q8NBS3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.13■■□□□ 1.13
SLC4A11Q8NBS3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.13■■□□□ 1.13
SLC4A11Q8NBS3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC4A11Q8NBS3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC4A11Q8NBS3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC4A11Q8NBS3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.13■■□□□ 1.13
SLC4A11Q8NBS3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.13■■□□□ 1.13
SLC4A11Q8NBS3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.13■■□□□ 1.13
SLC4A11Q8NBS3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SLC4A11Q8NBS3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.12■■□□□ 1.13
SLC4A11Q8NBS3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
SLC4A11Q8NBS3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SLC4A11Q8NBS3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.12■■□□□ 1.13
SLC4A11Q8NBS3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.12■■□□□ 1.13
SLC4A11Q8NBS3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SLC4A11Q8NBS3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.12■■□□□ 1.13
SLC4A11Q8NBS3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.12■■□□□ 1.13
SLC4A11Q8NBS3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
SLC4A11Q8NBS3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC4A11Q8NBS3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.12■■□□□ 1.13
SLC4A11Q8NBS3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SLC4A11Q8NBS3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC4A11Q8NBS3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.11■■□□□ 1.13
SLC4A11Q8NBS3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.11■■□□□ 1.13
SLC4A11Q8NBS3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
SLC4A11Q8NBS3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
SLC4A11Q8NBS3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.11■■□□□ 1.13
SLC4A11Q8NBS3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
SLC4A11Q8NBS3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.11■■□□□ 1.13
SLC4A11Q8NBS3 AC091799.1-201ENST00000422823 811 ntBASIC22.11■■□□□ 1.13
SLC4A11Q8NBS3 CNN2P6-201ENST00000439038 900 ntBASIC22.11■■□□□ 1.13
SLC4A11Q8NBS3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SLC4A11Q8NBS3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.11■■□□□ 1.13
SLC4A11Q8NBS3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SLC4A11Q8NBS3 AC080038.1-201ENST00000611274 1154 ntBASIC22.11■■□□□ 1.13
SLC4A11Q8NBS3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SLC4A11Q8NBS3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SLC4A11Q8NBS3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.11■■□□□ 1.13
SLC4A11Q8NBS3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SLC4A11Q8NBS3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SLC4A11Q8NBS3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SLC4A11Q8NBS3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SLC4A11Q8NBS3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms