Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.38■■□□□ 1.01
ATPAF2Q8N5M1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATPAF2Q8N5M1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
ATPAF2Q8N5M1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATPAF2Q8N5M1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATPAF2Q8N5M1 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.38■■□□□ 1.01
ATPAF2Q8N5M1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.38■■□□□ 1.01
ATPAF2Q8N5M1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.38■■□□□ 1.01
ATPAF2Q8N5M1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.38■■□□□ 1.01
ATPAF2Q8N5M1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
ATPAF2Q8N5M1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATPAF2Q8N5M1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
ATPAF2Q8N5M1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.38■■□□□ 1.01
ATPAF2Q8N5M1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.37■■□□□ 1.01
ATPAF2Q8N5M1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATPAF2Q8N5M1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATPAF2Q8N5M1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATPAF2Q8N5M1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATPAF2Q8N5M1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ATPAF2Q8N5M1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.37■■□□□ 1.01
ATPAF2Q8N5M1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.37■■□□□ 1.01
ATPAF2Q8N5M1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATPAF2Q8N5M1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATPAF2Q8N5M1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATPAF2Q8N5M1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
ATPAF2Q8N5M1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATPAF2Q8N5M1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATPAF2Q8N5M1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATPAF2Q8N5M1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ATPAF2Q8N5M1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATPAF2Q8N5M1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ATPAF2Q8N5M1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.36■■□□□ 1.01
ATPAF2Q8N5M1 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.36■■□□□ 1.01
ATPAF2Q8N5M1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.36■■□□□ 1.01
ATPAF2Q8N5M1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.36■■□□□ 1.01
ATPAF2Q8N5M1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.35■■□□□ 1.01
ATPAF2Q8N5M1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.35■■□□□ 1.01
ATPAF2Q8N5M1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.35■■□□□ 1.01
ATPAF2Q8N5M1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.35■■□□□ 1.01
ATPAF2Q8N5M1 UBE2DNL-204ENST00000602536 740 ntBASIC21.35■■□□□ 1.01
ATPAF2Q8N5M1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
ATPAF2Q8N5M1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATPAF2Q8N5M1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATPAF2Q8N5M1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATPAF2Q8N5M1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ATPAF2Q8N5M1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ATPAF2Q8N5M1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATPAF2Q8N5M1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATPAF2Q8N5M1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
ATPAF2Q8N5M1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.34■■□□□ 1.01
ATPAF2Q8N5M1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.34■■□□□ 1.01
ATPAF2Q8N5M1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATPAF2Q8N5M1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
ATPAF2Q8N5M1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.34■■□□□ 1.01
ATPAF2Q8N5M1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
ATPAF2Q8N5M1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATPAF2Q8N5M1 AC245052.3-201ENST00000450182 901 ntBASIC21.34■■□□□ 1.01
ATPAF2Q8N5M1 AC137761.2-201ENST00000561729 223 ntBASIC21.34■■□□□ 1.01
ATPAF2Q8N5M1 AC145350.3-201ENST00000569033 163 ntBASIC21.34■■□□□ 1.01
ATPAF2Q8N5M1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATPAF2Q8N5M1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATPAF2Q8N5M1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATPAF2Q8N5M1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATPAF2Q8N5M1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.33■■□□□ 1.01
ATPAF2Q8N5M1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATPAF2Q8N5M1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
ATPAF2Q8N5M1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATPAF2Q8N5M1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATPAF2Q8N5M1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.33■■□□□ 1.01
ATPAF2Q8N5M1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATPAF2Q8N5M1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATPAF2Q8N5M1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.33■■□□□ 1.01
ATPAF2Q8N5M1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATPAF2Q8N5M1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.33■■□□□ 1
ATPAF2Q8N5M1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ATPAF2Q8N5M1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATPAF2Q8N5M1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.32■■□□□ 1
ATPAF2Q8N5M1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ATPAF2Q8N5M1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATPAF2Q8N5M1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ATPAF2Q8N5M1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.32■■□□□ 1
ATPAF2Q8N5M1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATPAF2Q8N5M1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATPAF2Q8N5M1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.32■■□□□ 1
ATPAF2Q8N5M1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATPAF2Q8N5M1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.32■■□□□ 1
ATPAF2Q8N5M1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.32■■□□□ 1
ATPAF2Q8N5M1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ATPAF2Q8N5M1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.31■■□□□ 1
ATPAF2Q8N5M1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.31■■□□□ 1
ATPAF2Q8N5M1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
ATPAF2Q8N5M1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATPAF2Q8N5M1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATPAF2Q8N5M1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.31■■□□□ 1
ATPAF2Q8N5M1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.31■■□□□ 1
ATPAF2Q8N5M1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATPAF2Q8N5M1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.31■■□□□ 1
ATPAF2Q8N5M1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATPAF2Q8N5M1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.31■■□□□ 1
ATPAF2Q8N5M1 MYCNOS-205ENST00000641950 531 ntBASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms