Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RP1L1Q8IWN7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.86■□□□□ 0.61
RP1L1Q8IWN7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.86■□□□□ 0.61
RP1L1Q8IWN7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RP1L1Q8IWN7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.86■□□□□ 0.61
RP1L1Q8IWN7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.86■□□□□ 0.61
RP1L1Q8IWN7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
RP1L1Q8IWN7 AC087742.1-201ENST00000575880 1738 ntBASIC18.86■□□□□ 0.61
RP1L1Q8IWN7 AL135905.2-201ENST00000584934 1404 ntBASIC18.86■□□□□ 0.61
RP1L1Q8IWN7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
RP1L1Q8IWN7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RP1L1Q8IWN7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 AC069544.1-201ENST00000609399 999 ntBASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 KRT17P1-201ENST00000399211 1546 ntBASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 AC008403.3-201ENST00000598924 454 ntBASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 CYP2T3P-201ENST00000601990 817 ntBASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RP1L1Q8IWN7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RP1L1Q8IWN7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.84■□□□□ 0.61
RP1L1Q8IWN7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RP1L1Q8IWN7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.84■□□□□ 0.61
RP1L1Q8IWN7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RP1L1Q8IWN7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RP1L1Q8IWN7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RP1L1Q8IWN7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RP1L1Q8IWN7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RP1L1Q8IWN7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.84■□□□□ 0.61
RP1L1Q8IWN7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.84■□□□□ 0.61
RP1L1Q8IWN7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.84■□□□□ 0.61
RP1L1Q8IWN7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
RP1L1Q8IWN7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.84■□□□□ 0.61
RP1L1Q8IWN7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.84■□□□□ 0.61
RP1L1Q8IWN7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RP1L1Q8IWN7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.84■□□□□ 0.61
RP1L1Q8IWN7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.83■□□□□ 0.61
RP1L1Q8IWN7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RP1L1Q8IWN7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RP1L1Q8IWN7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.83■□□□□ 0.61
RP1L1Q8IWN7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RP1L1Q8IWN7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.83■□□□□ 0.61
RP1L1Q8IWN7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RP1L1Q8IWN7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.83■□□□□ 0.6
RP1L1Q8IWN7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RP1L1Q8IWN7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RP1L1Q8IWN7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RP1L1Q8IWN7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RP1L1Q8IWN7 LSM12P1-201ENST00000411836 588 ntBASIC18.83■□□□□ 0.6
RP1L1Q8IWN7 POM121L13P-201ENST00000422362 380 ntBASIC18.83■□□□□ 0.6
RP1L1Q8IWN7 AC079089.2-201ENST00000531211 1277 ntBASIC18.83■□□□□ 0.6
RP1L1Q8IWN7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.83■□□□□ 0.6
RP1L1Q8IWN7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.83■□□□□ 0.6
RP1L1Q8IWN7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.83■□□□□ 0.6
RP1L1Q8IWN7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RP1L1Q8IWN7 AL589743.5-201ENST00000616611 1050 ntBASIC18.83■□□□□ 0.6
RP1L1Q8IWN7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RP1L1Q8IWN7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.83■□□□□ 0.6
RP1L1Q8IWN7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.83■□□□□ 0.6
RP1L1Q8IWN7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RP1L1Q8IWN7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RP1L1Q8IWN7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RP1L1Q8IWN7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RP1L1Q8IWN7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RP1L1Q8IWN7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.82■□□□□ 0.6
RP1L1Q8IWN7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.82■□□□□ 0.6
RP1L1Q8IWN7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.82■□□□□ 0.6
RP1L1Q8IWN7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.82■□□□□ 0.6
RP1L1Q8IWN7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.82■□□□□ 0.6
RP1L1Q8IWN7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RP1L1Q8IWN7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.82■□□□□ 0.6
RP1L1Q8IWN7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RP1L1Q8IWN7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RP1L1Q8IWN7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RP1L1Q8IWN7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RP1L1Q8IWN7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.82■□□□□ 0.6
RP1L1Q8IWN7 AL359736.2-201ENST00000621992 437 ntBASIC18.82■□□□□ 0.6
RP1L1Q8IWN7 FAM197Y4-202ENST00000622692 608 ntBASIC18.82■□□□□ 0.6
RP1L1Q8IWN7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RP1L1Q8IWN7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.82■□□□□ 0.6
RP1L1Q8IWN7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms