Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
HIST2H3AQ71DI3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIST2H3AQ71DI3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.27■□□□□ 0.52
HIST2H3AQ71DI3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.27■□□□□ 0.52
HIST2H3AQ71DI3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.27■□□□□ 0.52
HIST2H3AQ71DI3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.27■□□□□ 0.52
HIST2H3AQ71DI3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST2H3AQ71DI3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.27■□□□□ 0.52
HIST2H3AQ71DI3 CCDC92B-201ENST00000575506 885 ntBASIC18.27■□□□□ 0.52
HIST2H3AQ71DI3 AC008175.2-201ENST00000612840 297 ntBASIC18.27■□□□□ 0.52
HIST2H3AQ71DI3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.27■□□□□ 0.52
HIST2H3AQ71DI3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIST2H3AQ71DI3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.27■□□□□ 0.51
HIST2H3AQ71DI3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HIST2H3AQ71DI3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST2H3AQ71DI3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST2H3AQ71DI3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HIST2H3AQ71DI3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST2H3AQ71DI3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HIST2H3AQ71DI3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HIST2H3AQ71DI3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.26■□□□□ 0.51
HIST2H3AQ71DI3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST2H3AQ71DI3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.26■□□□□ 0.51
HIST2H3AQ71DI3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HIST2H3AQ71DI3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.26■□□□□ 0.51
HIST2H3AQ71DI3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.26■□□□□ 0.51
HIST2H3AQ71DI3 AC010141.2-201ENST00000452426 721 ntBASIC18.26■□□□□ 0.51
HIST2H3AQ71DI3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.26■□□□□ 0.51
HIST2H3AQ71DI3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.26■□□□□ 0.51
HIST2H3AQ71DI3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.26■□□□□ 0.51
HIST2H3AQ71DI3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.26■□□□□ 0.51
HIST2H3AQ71DI3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.26■□□□□ 0.51
HIST2H3AQ71DI3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST2H3AQ71DI3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HIST2H3AQ71DI3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 KRT18P14-201ENST00000534205 1250 ntBASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.25■□□□□ 0.51
HIST2H3AQ71DI3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HIST2H3AQ71DI3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST2H3AQ71DI3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
HIST2H3AQ71DI3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST2H3AQ71DI3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST2H3AQ71DI3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HIST2H3AQ71DI3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST2H3AQ71DI3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HIST2H3AQ71DI3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST2H3AQ71DI3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST2H3AQ71DI3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HIST2H3AQ71DI3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.24■□□□□ 0.51
HIST2H3AQ71DI3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HIST2H3AQ71DI3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.24■□□□□ 0.51
HIST2H3AQ71DI3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HIST2H3AQ71DI3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.24■□□□□ 0.51
HIST2H3AQ71DI3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.24■□□□□ 0.51
HIST2H3AQ71DI3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST2H3AQ71DI3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HIST2H3AQ71DI3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HIST2H3AQ71DI3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HIST2H3AQ71DI3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST2H3AQ71DI3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST2H3AQ71DI3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HIST2H3AQ71DI3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.23■□□□□ 0.51
HIST2H3AQ71DI3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HIST2H3AQ71DI3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.23■□□□□ 0.51
HIST2H3AQ71DI3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
HIST2H3AQ71DI3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIST2H3AQ71DI3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST2H3AQ71DI3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.23■□□□□ 0.51
HIST2H3AQ71DI3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.23■□□□□ 0.51
HIST2H3AQ71DI3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.23■□□□□ 0.51
HIST2H3AQ71DI3 AC104187.1-201ENST00000607510 612 ntBASIC18.23■□□□□ 0.51
HIST2H3AQ71DI3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.23■□□□□ 0.51
HIST2H3AQ71DI3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.23■□□□□ 0.51
HIST2H3AQ71DI3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HIST2H3AQ71DI3 KRT16P2-201ENST00000414673 1423 ntBASIC18.23■□□□□ 0.51
HIST2H3AQ71DI3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
HIST2H3AQ71DI3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HIST2H3AQ71DI3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST2H3AQ71DI3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms