Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00575Q6W349 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00575Q6W349 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LINC00575Q6W349 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00575Q6W349 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
LINC00575Q6W349 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00575Q6W349 AC112907.3-201ENST00000577781 2400 ntBASIC13.19□□□□□ -0.3
LINC00575Q6W349 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00575Q6W349 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LINC00575Q6W349 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00575Q6W349 SENP5-202ENST00000419026 973 ntTSL 3 BASIC13.19□□□□□ -0.3
LINC00575Q6W349 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00575Q6W349 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00575Q6W349 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
LINC00575Q6W349 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00575Q6W349 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00575Q6W349 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00575Q6W349 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LINC00575Q6W349 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00575Q6W349 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00575Q6W349 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00575Q6W349 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00575Q6W349 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00575Q6W349 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LINC00575Q6W349 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00575Q6W349 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00575Q6W349 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00575Q6W349 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00575Q6W349 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00575Q6W349 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00575Q6W349 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LINC00575Q6W349 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00575Q6W349 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00575Q6W349 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00575Q6W349 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
LINC00575Q6W349 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00575Q6W349 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00575Q6W349 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00575Q6W349 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LINC00575Q6W349 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00575Q6W349 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00575Q6W349 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00575Q6W349 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00575Q6W349 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00575Q6W349 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC13.18□□□□□ -0.3
LINC00575Q6W349 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00575Q6W349 CLTA-210ENST00000540080 989 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00575Q6W349 AL034346.1-201ENST00000568244 1277 ntBASIC13.18□□□□□ -0.3
LINC00575Q6W349 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00575Q6W349 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
LINC00575Q6W349 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00575Q6W349 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC00575Q6W349 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00575Q6W349 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
LINC00575Q6W349 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC13.18□□□□□ -0.3
LINC00575Q6W349 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00575Q6W349 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00575Q6W349 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00575Q6W349 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LINC00575Q6W349 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00575Q6W349 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00575Q6W349 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00575Q6W349 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00575Q6W349 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00575Q6W349 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00575Q6W349 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00575Q6W349 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
LINC00575Q6W349 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
LINC00575Q6W349 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00575Q6W349 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00575Q6W349 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00575Q6W349 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC00575Q6W349 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
LINC00575Q6W349 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
LINC00575Q6W349 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00575Q6W349 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00575Q6W349 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00575Q6W349 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00575Q6W349 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC13.17□□□□□ -0.3
LINC00575Q6W349 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00575Q6W349 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00575Q6W349 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00575Q6W349 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00575Q6W349 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00575Q6W349 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00575Q6W349 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00575Q6W349 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00575Q6W349 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC13.17□□□□□ -0.3
LINC00575Q6W349 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
LINC00575Q6W349 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00575Q6W349 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
LINC00575Q6W349 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00575Q6W349 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC13.16□□□□□ -0.3
LINC00575Q6W349 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LINC00575Q6W349 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00575Q6W349 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LINC00575Q6W349 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LINC00575Q6W349 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00575Q6W349 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LINC00575Q6W349 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms