Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RFWD3Q6PCD5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFWD3Q6PCD5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFWD3Q6PCD5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFWD3Q6PCD5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RFWD3Q6PCD5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFWD3Q6PCD5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFWD3Q6PCD5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.72■■□□□ 1.07
RFWD3Q6PCD5 POU5F1P4-201ENST00000413175 1085 ntBASIC21.72■■□□□ 1.07
RFWD3Q6PCD5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.72■■□□□ 1.07
RFWD3Q6PCD5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.72■■□□□ 1.07
RFWD3Q6PCD5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.72■■□□□ 1.07
RFWD3Q6PCD5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.72■■□□□ 1.07
RFWD3Q6PCD5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
RFWD3Q6PCD5 AC010536.3-201ENST00000620306 533 ntBASIC21.72■■□□□ 1.07
RFWD3Q6PCD5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RFWD3Q6PCD5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RFWD3Q6PCD5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFWD3Q6PCD5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RFWD3Q6PCD5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.71■■□□□ 1.07
RFWD3Q6PCD5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFWD3Q6PCD5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.71■■□□□ 1.07
RFWD3Q6PCD5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFWD3Q6PCD5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFWD3Q6PCD5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.71■■□□□ 1.07
RFWD3Q6PCD5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.71■■□□□ 1.07
RFWD3Q6PCD5 CROCCP5-201ENST00000436658 830 ntBASIC21.71■■□□□ 1.07
RFWD3Q6PCD5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.71■■□□□ 1.07
RFWD3Q6PCD5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RFWD3Q6PCD5 AC120498.10-201ENST00000621827 505 ntBASIC21.71■■□□□ 1.07
RFWD3Q6PCD5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFWD3Q6PCD5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFWD3Q6PCD5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFWD3Q6PCD5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFWD3Q6PCD5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFWD3Q6PCD5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFWD3Q6PCD5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RFWD3Q6PCD5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
RFWD3Q6PCD5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFWD3Q6PCD5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.7■■□□□ 1.06
RFWD3Q6PCD5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RFWD3Q6PCD5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.7■■□□□ 1.06
RFWD3Q6PCD5 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.7■■□□□ 1.06
RFWD3Q6PCD5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.7■■□□□ 1.06
RFWD3Q6PCD5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.7■■□□□ 1.06
RFWD3Q6PCD5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.7■■□□□ 1.06
RFWD3Q6PCD5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.7■■□□□ 1.06
RFWD3Q6PCD5 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.7■■□□□ 1.06
RFWD3Q6PCD5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFWD3Q6PCD5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RFWD3Q6PCD5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFWD3Q6PCD5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.7■■□□□ 1.06
RFWD3Q6PCD5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFWD3Q6PCD5 AC026310.3-201ENST00000625186 2373 ntBASIC21.69■■□□□ 1.06
RFWD3Q6PCD5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFWD3Q6PCD5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.69■■□□□ 1.06
RFWD3Q6PCD5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFWD3Q6PCD5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RFWD3Q6PCD5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFWD3Q6PCD5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.69■■□□□ 1.06
RFWD3Q6PCD5 SLC7A5P1-201ENST00000568957 537 ntBASIC21.69■■□□□ 1.06
RFWD3Q6PCD5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RFWD3Q6PCD5 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.69■■□□□ 1.06
RFWD3Q6PCD5 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.69■■□□□ 1.06
RFWD3Q6PCD5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
RFWD3Q6PCD5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.69■■□□□ 1.06
RFWD3Q6PCD5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFWD3Q6PCD5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.69■■□□□ 1.06
RFWD3Q6PCD5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFWD3Q6PCD5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RFWD3Q6PCD5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFWD3Q6PCD5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFWD3Q6PCD5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFWD3Q6PCD5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.68■■□□□ 1.06
RFWD3Q6PCD5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFWD3Q6PCD5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.68■■□□□ 1.06
RFWD3Q6PCD5 MIR663A-201ENST00000385250 93 ntBASIC21.68■■□□□ 1.06
RFWD3Q6PCD5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.68■■□□□ 1.06
RFWD3Q6PCD5 CNN2P6-201ENST00000439038 900 ntBASIC21.68■■□□□ 1.06
RFWD3Q6PCD5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFWD3Q6PCD5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.68■■□□□ 1.06
RFWD3Q6PCD5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.68■■□□□ 1.06
RFWD3Q6PCD5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.68■■□□□ 1.06
RFWD3Q6PCD5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.68■■□□□ 1.06
RFWD3Q6PCD5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFWD3Q6PCD5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFWD3Q6PCD5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RFWD3Q6PCD5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.68■■□□□ 1.06
RFWD3Q6PCD5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.68■■□□□ 1.06
RFWD3Q6PCD5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.68■■□□□ 1.06
RFWD3Q6PCD5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RFWD3Q6PCD5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.68■■□□□ 1.06
RFWD3Q6PCD5 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.68■■□□□ 1.06
RFWD3Q6PCD5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RFWD3Q6PCD5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFWD3Q6PCD5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFWD3Q6PCD5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFWD3Q6PCD5 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RFWD3Q6PCD5 AC007322.1-201ENST00000426983 750 ntBASIC21.67■■□□□ 1.06
RFWD3Q6PCD5 AC006970.2-201ENST00000450065 779 ntBASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms