Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.62■■□□□ 1.21
CNKSR3Q6P9H4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CNKSR3Q6P9H4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.62■■□□□ 1.21
CNKSR3Q6P9H4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CNKSR3Q6P9H4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
CNKSR3Q6P9H4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CNKSR3Q6P9H4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CNKSR3Q6P9H4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.61■■□□□ 1.21
CNKSR3Q6P9H4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.61■■□□□ 1.21
CNKSR3Q6P9H4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CNKSR3Q6P9H4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CNKSR3Q6P9H4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CNKSR3Q6P9H4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CNKSR3Q6P9H4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CNKSR3Q6P9H4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CNKSR3Q6P9H4 SNORA78-201ENST00000459373 127 ntBASIC22.61■■□□□ 1.21
CNKSR3Q6P9H4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.61■■□□□ 1.21
CNKSR3Q6P9H4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CNKSR3Q6P9H4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.61■■□□□ 1.21
CNKSR3Q6P9H4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
CNKSR3Q6P9H4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.61■■□□□ 1.21
CNKSR3Q6P9H4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CNKSR3Q6P9H4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CNKSR3Q6P9H4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CNKSR3Q6P9H4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.6■■□□□ 1.21
CNKSR3Q6P9H4 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.6■■□□□ 1.21
CNKSR3Q6P9H4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CNKSR3Q6P9H4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CNKSR3Q6P9H4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.6■■□□□ 1.21
CNKSR3Q6P9H4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.6■■□□□ 1.21
CNKSR3Q6P9H4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.6■■□□□ 1.21
CNKSR3Q6P9H4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CNKSR3Q6P9H4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CNKSR3Q6P9H4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CNKSR3Q6P9H4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CNKSR3Q6P9H4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CNKSR3Q6P9H4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.6■■□□□ 1.21
CNKSR3Q6P9H4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CNKSR3Q6P9H4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.59■■□□□ 1.21
CNKSR3Q6P9H4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.59■■□□□ 1.21
CNKSR3Q6P9H4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.59■■□□□ 1.21
CNKSR3Q6P9H4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CNKSR3Q6P9H4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CNKSR3Q6P9H4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.59■■□□□ 1.21
CNKSR3Q6P9H4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.59■■□□□ 1.21
CNKSR3Q6P9H4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CNKSR3Q6P9H4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.59■■□□□ 1.21
CNKSR3Q6P9H4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CNKSR3Q6P9H4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.59■■□□□ 1.21
CNKSR3Q6P9H4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.59■■□□□ 1.21
CNKSR3Q6P9H4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
CNKSR3Q6P9H4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
CNKSR3Q6P9H4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CNKSR3Q6P9H4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CNKSR3Q6P9H4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CNKSR3Q6P9H4 CYP21A1P-202ENST00000354927 1481 ntBASIC22.59■■□□□ 1.21
CNKSR3Q6P9H4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
CNKSR3Q6P9H4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.58■■□□□ 1.21
CNKSR3Q6P9H4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
CNKSR3Q6P9H4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.58■■□□□ 1.21
CNKSR3Q6P9H4 POM121L13P-201ENST00000422362 380 ntBASIC22.58■■□□□ 1.21
CNKSR3Q6P9H4 ECEL1P3-201ENST00000427961 737 ntBASIC22.58■■□□□ 1.21
CNKSR3Q6P9H4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
CNKSR3Q6P9H4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
CNKSR3Q6P9H4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.58■■□□□ 1.21
CNKSR3Q6P9H4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CNKSR3Q6P9H4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.2
CNKSR3Q6P9H4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.2
CNKSR3Q6P9H4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.57■■□□□ 1.2
CNKSR3Q6P9H4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CNKSR3Q6P9H4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
CNKSR3Q6P9H4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CNKSR3Q6P9H4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CNKSR3Q6P9H4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CNKSR3Q6P9H4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
CNKSR3Q6P9H4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CNKSR3Q6P9H4 AC105020.6-201ENST00000621523 1217 ntBASIC22.57■■□□□ 1.2
CNKSR3Q6P9H4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CNKSR3Q6P9H4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CNKSR3Q6P9H4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CNKSR3Q6P9H4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.57■■□□□ 1.2
CNKSR3Q6P9H4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CNKSR3Q6P9H4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CNKSR3Q6P9H4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
CNKSR3Q6P9H4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CNKSR3Q6P9H4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CNKSR3Q6P9H4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CNKSR3Q6P9H4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CNKSR3Q6P9H4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.56■■□□□ 1.2
CNKSR3Q6P9H4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CNKSR3Q6P9H4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CNKSR3Q6P9H4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CNKSR3Q6P9H4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.56■■□□□ 1.2
CNKSR3Q6P9H4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.55■■□□□ 1.2
CNKSR3Q6P9H4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.55■■□□□ 1.2
CNKSR3Q6P9H4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.55■■□□□ 1.2
CNKSR3Q6P9H4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.55■■□□□ 1.2
CNKSR3Q6P9H4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CNKSR3Q6P9H4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CNKSR3Q6P9H4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms