Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 AC006128.1-201ENST00000624704 1661 ntBASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 AC073130.3-201ENST00000624389 2278 ntBASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 LINC01006-201ENST00000333319 2292 ntBASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 AC121338.2-201ENST00000622535 1744 ntBASIC21.72■■□□□ 1.07
ATP13A4Q4VNC1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP13A4Q4VNC1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATP13A4Q4VNC1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.71■■□□□ 1.07
ATP13A4Q4VNC1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.71■■□□□ 1.07
ATP13A4Q4VNC1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP13A4Q4VNC1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP13A4Q4VNC1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP13A4Q4VNC1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.71■■□□□ 1.07
ATP13A4Q4VNC1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.71■■□□□ 1.07
ATP13A4Q4VNC1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP13A4Q4VNC1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP13A4Q4VNC1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.71■■□□□ 1.07
ATP13A4Q4VNC1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.7■■□□□ 1.06
ATP13A4Q4VNC1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A4Q4VNC1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
ATP13A4Q4VNC1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.7■■□□□ 1.06
ATP13A4Q4VNC1 TERF1P2-201ENST00000583350 1212 ntBASIC21.7■■□□□ 1.06
ATP13A4Q4VNC1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
ATP13A4Q4VNC1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A4Q4VNC1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.7■■□□□ 1.06
ATP13A4Q4VNC1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A4Q4VNC1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.7■■□□□ 1.06
ATP13A4Q4VNC1 FEM1AP1-201ENST00000431297 1995 ntBASIC21.7■■□□□ 1.06
ATP13A4Q4VNC1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A4Q4VNC1 AP004607.4-201ENST00000530158 1459 ntBASIC21.7■■□□□ 1.06
ATP13A4Q4VNC1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A4Q4VNC1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A4Q4VNC1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A4Q4VNC1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP13A4Q4VNC1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.69■■□□□ 1.06
ATP13A4Q4VNC1 AC092667.1-201ENST00000434301 2586 ntBASIC21.69■■□□□ 1.06
ATP13A4Q4VNC1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
ATP13A4Q4VNC1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP13A4Q4VNC1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.69■■□□□ 1.06
ATP13A4Q4VNC1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ATP13A4Q4VNC1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP13A4Q4VNC1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP13A4Q4VNC1 AC123595.1-201ENST00000440769 1046 ntBASIC21.69■■□□□ 1.06
ATP13A4Q4VNC1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP13A4Q4VNC1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.69■■□□□ 1.06
ATP13A4Q4VNC1 CCDC92B-201ENST00000575506 885 ntBASIC21.69■■□□□ 1.06
ATP13A4Q4VNC1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
ATP13A4Q4VNC1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP13A4Q4VNC1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ATP13A4Q4VNC1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 YBX1P1-201ENST00000445822 960 ntBASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 AC138907.5-202ENST00000569484 235 ntBASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP13A4Q4VNC1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.67■■□□□ 1.06
ATP13A4Q4VNC1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.67■■□□□ 1.06
ATP13A4Q4VNC1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.67■■□□□ 1.06
ATP13A4Q4VNC1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
ATP13A4Q4VNC1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
ATP13A4Q4VNC1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP13A4Q4VNC1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.67■■□□□ 1.06
ATP13A4Q4VNC1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP13A4Q4VNC1 AC104187.1-201ENST00000607510 612 ntBASIC21.67■■□□□ 1.06
ATP13A4Q4VNC1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
ATP13A4Q4VNC1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP13A4Q4VNC1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP13A4Q4VNC1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP13A4Q4VNC1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP13A4Q4VNC1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms