Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC3A1Q07837 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC3A1Q07837 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SLC3A1Q07837 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC3A1Q07837 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC3A1Q07837 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
SLC3A1Q07837 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SLC3A1Q07837 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC3A1Q07837 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC3A1Q07837 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SLC3A1Q07837 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SLC3A1Q07837 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC3A1Q07837 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC3A1Q07837 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC3A1Q07837 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC3A1Q07837 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC3A1Q07837 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SLC3A1Q07837 OR2I1P-207ENST00000453522 948 ntBASIC18.66■□□□□ 0.58
SLC3A1Q07837 AC105265.2-201ENST00000467189 838 ntBASIC18.66■□□□□ 0.58
SLC3A1Q07837 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC3A1Q07837 AC126544.1-201ENST00000580842 1059 ntBASIC18.66■□□□□ 0.58
SLC3A1Q07837 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC3A1Q07837 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC3A1Q07837 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC3A1Q07837 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SLC3A1Q07837 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SLC3A1Q07837 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC3A1Q07837 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC3A1Q07837 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC3A1Q07837 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC3A1Q07837 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC3A1Q07837 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SLC3A1Q07837 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC3A1Q07837 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC3A1Q07837 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC3A1Q07837 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC3A1Q07837 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC3A1Q07837 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC3A1Q07837 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.65■□□□□ 0.58
SLC3A1Q07837 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC3A1Q07837 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC3A1Q07837 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SLC3A1Q07837 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC3A1Q07837 AC003102.1-202ENST00000563394 1796 ntBASIC18.65■□□□□ 0.58
SLC3A1Q07837 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
SLC3A1Q07837 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
SLC3A1Q07837 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC3A1Q07837 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC3A1Q07837 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC3A1Q07837 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC3A1Q07837 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
SLC3A1Q07837 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC3A1Q07837 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC3A1Q07837 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.64■□□□□ 0.57
SLC3A1Q07837 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC3A1Q07837 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.64■□□□□ 0.57
SLC3A1Q07837 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC3A1Q07837 AC010141.3-201ENST00000456659 717 ntBASIC18.64■□□□□ 0.57
SLC3A1Q07837 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.64■□□□□ 0.57
SLC3A1Q07837 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.64■□□□□ 0.57
SLC3A1Q07837 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC3A1Q07837 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SLC3A1Q07837 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC3A1Q07837 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC3A1Q07837 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC3A1Q07837 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SLC3A1Q07837 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SLC3A1Q07837 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC3A1Q07837 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SLC3A1Q07837 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC3A1Q07837 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC3A1Q07837 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SLC3A1Q07837 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC3A1Q07837 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SLC3A1Q07837 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC3A1Q07837 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC3A1Q07837 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.63■□□□□ 0.57
SLC3A1Q07837 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC3A1Q07837 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SLC3A1Q07837 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
SLC3A1Q07837 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
SLC3A1Q07837 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.63■□□□□ 0.57
SLC3A1Q07837 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SLC3A1Q07837 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC3A1Q07837 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC3A1Q07837 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC3A1Q07837 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC3A1Q07837 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SLC3A1Q07837 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SLC3A1Q07837 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC3A1Q07837 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC3A1Q07837 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.62■□□□□ 0.57
SLC3A1Q07837 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC3A1Q07837 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.62■□□□□ 0.57
SLC3A1Q07837 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC3A1Q07837 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SLC3A1Q07837 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC3A1Q07837 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC3A1Q07837 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC3A1Q07837 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms