Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.47■□□□□ 0.71
SMSP52788 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.47■□□□□ 0.71
SMSP52788 AC004854.2-201ENST00000608450 1441 ntBASIC19.47■□□□□ 0.71
SMSP52788 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.47■□□□□ 0.71
SMSP52788 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SMSP52788 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SMSP52788 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.47■□□□□ 0.71
SMSP52788 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMSP52788 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SMSP52788 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SMSP52788 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMSP52788 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMSP52788 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.46■□□□□ 0.71
SMSP52788 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.46■□□□□ 0.71
SMSP52788 KRT18P61-201ENST00000585825 1298 ntBASIC19.46■□□□□ 0.71
SMSP52788 AC104771.1-201ENST00000603335 964 ntBASIC19.46■□□□□ 0.71
SMSP52788 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.46■□□□□ 0.71
SMSP52788 AL109923.1-201ENST00000618799 583 ntBASIC19.46■□□□□ 0.71
SMSP52788 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.46■□□□□ 0.71
SMSP52788 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMSP52788 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SMSP52788 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
SMSP52788 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMSP52788 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.46■□□□□ 0.71
SMSP52788 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SMSP52788 OR7E47P-201ENST00000546390 1422 ntBASIC19.45■□□□□ 0.7
SMSP52788 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SMSP52788 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMSP52788 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SMSP52788 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.45■□□□□ 0.7
SMSP52788 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.45■□□□□ 0.7
SMSP52788 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.45■□□□□ 0.7
SMSP52788 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMSP52788 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMSP52788 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMSP52788 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMSP52788 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMSP52788 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMSP52788 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMSP52788 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMSP52788 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.44■□□□□ 0.7
SMSP52788 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.44■□□□□ 0.7
SMSP52788 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.44■□□□□ 0.7
SMSP52788 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMSP52788 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMSP52788 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SMSP52788 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMSP52788 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMSP52788 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMSP52788 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMSP52788 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMSP52788 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SMSP52788 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.44■□□□□ 0.7
SMSP52788 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMSP52788 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMSP52788 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMSP52788 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMSP52788 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SMSP52788 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.43■□□□□ 0.7
SMSP52788 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMSP52788 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.43■□□□□ 0.7
SMSP52788 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SMSP52788 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.43■□□□□ 0.7
SMSP52788 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
SMSP52788 AL355802.2-201ENST00000402069 882 ntBASIC19.43■□□□□ 0.7
SMSP52788 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.43■□□□□ 0.7
SMSP52788 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.43■□□□□ 0.7
SMSP52788 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.43■□□□□ 0.7
SMSP52788 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.43■□□□□ 0.7
SMSP52788 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SMSP52788 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SMSP52788 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.43■□□□□ 0.7
SMSP52788 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMSP52788 AC026471.6-201ENST00000622954 1905 ntBASIC19.43■□□□□ 0.7
SMSP52788 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMSP52788 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SMSP52788 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMSP52788 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.42■□□□□ 0.7
SMSP52788 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SMSP52788 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMSP52788 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SMSP52788 AC010141.3-201ENST00000456659 717 ntBASIC19.42■□□□□ 0.7
SMSP52788 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.42■□□□□ 0.7
SMSP52788 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.42■□□□□ 0.7
SMSP52788 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SMSP52788 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMSP52788 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMSP52788 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMSP52788 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMSP52788 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMSP52788 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.42■□□□□ 0.7
SMSP52788 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMSP52788 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMSP52788 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SMSP52788 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMSP52788 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMSP52788 AC073130.3-201ENST00000624389 2278 ntBASIC19.41■□□□□ 0.7
SMSP52788 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.41■□□□□ 0.7
SMSP52788 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.41■□□□□ 0.7
SMSP52788 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms