Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP13P45452 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP13P45452 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP13P45452 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MMP13P45452 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
MMP13P45452 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP13P45452 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP13P45452 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP13P45452 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP13P45452 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP13P45452 AC079140.4-201ENST00000507448 529 ntBASIC21.63■■□□□ 1.05
MMP13P45452 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.63■■□□□ 1.05
MMP13P45452 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.63■■□□□ 1.05
MMP13P45452 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
MMP13P45452 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
MMP13P45452 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP13P45452 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
MMP13P45452 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MMP13P45452 AC007952.6-201ENST00000573168 2673 ntBASIC21.63■■□□□ 1.05
MMP13P45452 AC003957.1-201ENST00000625108 2673 ntBASIC21.63■■□□□ 1.05
MMP13P45452 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MMP13P45452 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
MMP13P45452 AC097381.1-201ENST00000429019 1296 ntBASIC21.62■■□□□ 1.05
MMP13P45452 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.62■■□□□ 1.05
MMP13P45452 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
MMP13P45452 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.62■■□□□ 1.05
MMP13P45452 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.62■■□□□ 1.05
MMP13P45452 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.62■■□□□ 1.05
MMP13P45452 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MMP13P45452 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.61■■□□□ 1.05
MMP13P45452 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.61■■□□□ 1.05
MMP13P45452 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MMP13P45452 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MMP13P45452 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MMP13P45452 KRT18P14-201ENST00000534205 1250 ntBASIC21.61■■□□□ 1.05
MMP13P45452 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.61■■□□□ 1.05
MMP13P45452 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.61■■□□□ 1.05
MMP13P45452 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.61■■□□□ 1.05
MMP13P45452 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
MMP13P45452 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MMP13P45452 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.61■■□□□ 1.05
MMP13P45452 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MMP13P45452 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MMP13P45452 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MMP13P45452 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MMP13P45452 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP13P45452 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP13P45452 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP13P45452 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MMP13P45452 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP13P45452 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MMP13P45452 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP13P45452 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP13P45452 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP13P45452 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.6■■□□□ 1.05
MMP13P45452 MIR6821-201ENST00000617625 74 ntBASIC21.6■■□□□ 1.05
MMP13P45452 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
MMP13P45452 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP13P45452 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MMP13P45452 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MMP13P45452 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
MMP13P45452 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
MMP13P45452 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.59■■□□□ 1.05
MMP13P45452 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
MMP13P45452 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.59■■□□□ 1.05
MMP13P45452 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MMP13P45452 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
MMP13P45452 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
MMP13P45452 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
MMP13P45452 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.59■■□□□ 1.05
MMP13P45452 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MMP13P45452 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.58■■□□□ 1.05
MMP13P45452 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.58■■□□□ 1.05
MMP13P45452 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
MMP13P45452 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.58■■□□□ 1.05
MMP13P45452 RARRES2P6-201ENST00000567333 442 ntBASIC21.58■■□□□ 1.05
MMP13P45452 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MMP13P45452 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MMP13P45452 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
MMP13P45452 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
MMP13P45452 KRT87P-202ENST00000534226 1464 ntBASIC21.58■■□□□ 1.04
MMP13P45452 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.57■■□□□ 1.04
MMP13P45452 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP13P45452 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP13P45452 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP13P45452 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP13P45452 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP13P45452 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP13P45452 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MMP13P45452 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.57■■□□□ 1.04
MMP13P45452 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
MMP13P45452 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
MMP13P45452 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP13P45452 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.57■■□□□ 1.04
MMP13P45452 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP13P45452 AC087623.3-201ENST00000607047 1098 ntBASIC21.57■■□□□ 1.04
MMP13P45452 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.57■■□□□ 1.04
MMP13P45452 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP13P45452 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP13P45452 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms