Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 PEX4YGR133W 552 nt4.58□□□□□ -1.68
MSH4P40965 DPH1YIL103W 1278 nt4.58□□□□□ -1.68
MSH4P40965 NNF1YJR112W 606 nt4.58□□□□□ -1.68
MSH4P40965 YLR154W-BYLR154W-B 165 nt4.58□□□□□ -1.68
MSH4P40965 BSC3YLR465C 309 nt4.58□□□□□ -1.68
MSH4P40965 ARG80YMR042W 534 nt4.58□□□□□ -1.68
MSH4P40965 PDR17YNL264C 1053 nt4.58□□□□□ -1.68
MSH4P40965 RIM4YHL024W 2142 nt4.58□□□□□ -1.68
MSH4P40965 HAA1YPR008W 2085 nt4.58□□□□□ -1.68
MSH4P40965 WHI3YNL197C 1986 nt4.58□□□□□ -1.68
MSH4P40965 HUL5YGL141W 2733 nt4.58□□□□□ -1.68
MSH4P40965 NTF2YER009W 378 nt4.57□□□□□ -1.68
MSH4P40965 MTM1YGR257C 1101 nt4.57□□□□□ -1.68
MSH4P40965 YIR014WYIR014W 729 nt4.57□□□□□ -1.68
MSH4P40965 PDP3YLR455W 915 nt4.57□□□□□ -1.68
MSH4P40965 HUB1YNR032C-A 222 nt4.57□□□□□ -1.68
MSH4P40965 PHO88YBR106W 567 nt4.57□□□□□ -1.68
MSH4P40965 ABP140YOR239W 1887 nt4.56□□□□□ -1.68
MSH4P40965 NUP85YJR042W 2235 nt4.56□□□□□ -1.68
MSH4P40965 FMP25YLR077W 1752 nt4.56□□□□□ -1.68
MSH4P40965 FAS2YPL231W 5664 nt4.56□□□□□ -1.68
MSH4P40965 VMA10YHR039C-A 345 nt4.56□□□□□ -1.68
MSH4P40965 YIR020C-BYIR020C-B 735 nt4.56□□□□□ -1.68
MSH4P40965 YMR087WYMR087W 855 nt4.56□□□□□ -1.68
MSH4P40965 YNL337WYNL337W 255 nt4.56□□□□□ -1.68
MSH4P40965 YOR203WYOR203W 354 nt4.56□□□□□ -1.68
MSH4P40965 CDC55YGL190C 1581 nt4.56□□□□□ -1.68
MSH4P40965 YPR003CYPR003C 2265 nt4.56□□□□□ -1.68
MSH4P40965 GPI10YGL142C 1851 nt4.56□□□□□ -1.68
MSH4P40965 TPO5YKL174C 1857 nt4.56□□□□□ -1.68
MSH4P40965 SEN54YPL083C 1404 nt4.55□□□□□ -1.68
MSH4P40965 TCB3YML072C 4638 nt4.55□□□□□ -1.68
MSH4P40965 YKL183C-AYKL183C-A 213 nt4.55□□□□□ -1.68
MSH4P40965 DIB1YPR082C 432 nt4.55□□□□□ -1.68
MSH4P40965 RPN3YER021W 1572 nt4.55□□□□□ -1.68
MSH4P40965 YML096WYML096W 1578 nt4.55□□□□□ -1.68
MSH4P40965 PKP2YGL059W 1476 nt4.55□□□□□ -1.68
MSH4P40965 SRP72YPL210C 1923 nt4.54□□□□□ -1.68
MSH4P40965 YDR230WYDR230W 348 nt4.54□□□□□ -1.68
MSH4P40965 YJR112W-AYJR112W-A 330 nt4.54□□□□□ -1.68
MSH4P40965 YOL134CYOL134C 390 nt4.54□□□□□ -1.68
MSH4P40965 GLC3YEL011W 2115 nt4.54□□□□□ -1.68
MSH4P40965 STP1YDR463W 1560 nt4.53□□□□□ -1.68
MSH4P40965 LST4YKL176C 2487 nt4.53□□□□□ -1.68
MSH4P40965 RPS29BYDL061C 171 nt4.53□□□□□ -1.68
MSH4P40965 FMN1YDR236C 657 nt4.53□□□□□ -1.68
MSH4P40965 ERV1YGR029W 570 nt4.53□□□□□ -1.68
MSH4P40965 YJR079WYJR079W 330 nt4.53□□□□□ -1.68
MSH4P40965 VPS63YLR261C 327 nt4.53□□□□□ -1.68
MSH4P40965 DAL5YJR152W 1632 nt4.53□□□□□ -1.68
MSH4P40965 RPO31YOR116C 4383 nt4.53□□□□□ -1.68
MSH4P40965 YGL039WYGL039W 1047 nt4.52□□□□□ -1.69
MSH4P40965 YHL037CYHL037C 402 nt4.52□□□□□ -1.69
MSH4P40965 EMC2YJR088C 879 nt4.52□□□□□ -1.69
MSH4P40965 ARV1YLR242C 966 nt4.52□□□□□ -1.69
MSH4P40965 ASC1YMR116C 960 nt4.52□□□□□ -1.69
MSH4P40965 ERG2YMR202W 669 nt4.52□□□□□ -1.69
MSH4P40965 YPL107WYPL107W 747 nt4.52□□□□□ -1.69
MSH4P40965 SHG1YBR258C 429 nt4.52□□□□□ -1.69
MSH4P40965 VID27YNL212W 2349 nt4.51□□□□□ -1.69
MSH4P40965 SNF2YOR290C 5112 nt4.51□□□□□ -1.69
MSH4P40965 ERG5YMR015C 1617 nt4.51□□□□□ -1.69
MSH4P40965 IOC2YLR095C 2439 nt4.51□□□□□ -1.69
MSH4P40965 YDL152WYDL152W 366 nt4.51□□□□□ -1.69
MSH4P40965 RPB3YIL021W 957 nt4.51□□□□□ -1.69
MSH4P40965 SGN1YIR001C 753 nt4.51□□□□□ -1.69
MSH4P40965 YNL276CYNL276C 396 nt4.51□□□□□ -1.69
MSH4P40965 TDA1YMR291W 1761 nt4.5□□□□□ -1.69
MSH4P40965 SWC4YGR002C 1431 nt4.5□□□□□ -1.69
MSH4P40965 MRH1YDR033W 963 nt4.5□□□□□ -1.69
MSH4P40965 CRG1YHR209W 876 nt4.5□□□□□ -1.69
MSH4P40965 RGI2YIL057C 495 nt4.5□□□□□ -1.69
MSH4P40965 MRPL31YKL138C 396 nt4.5□□□□□ -1.69
MSH4P40965 YML009C-AYML009C-A 327 nt4.5□□□□□ -1.69
MSH4P40965 ARR2YPR200C 393 nt4.5□□□□□ -1.69
MSH4P40965 YKL050CYKL050C 2769 nt4.5□□□□□ -1.69
MSH4P40965 SSE2YBR169C 2082 nt4.49□□□□□ -1.69
MSH4P40965 KIP3YGL216W 2418 nt4.49□□□□□ -1.69
MSH4P40965 YCR090CYCR090C 549 nt4.49□□□□□ -1.69
MSH4P40965 SLD5YDR489W 885 nt4.49□□□□□ -1.69
MSH4P40965 POG1YIL122W 1056 nt4.49□□□□□ -1.69
MSH4P40965 BET5YML077W 480 nt4.49□□□□□ -1.69
MSH4P40965 YOR331CYOR331C 558 nt4.49□□□□□ -1.69
MSH4P40965 YPR096CYPR096C 303 nt4.49□□□□□ -1.69
MSH4P40965 SSF2YDR312W 1362 nt4.49□□□□□ -1.69
MSH4P40965 YOR022CYOR022C 2148 nt4.49□□□□□ -1.69
MSH4P40965 YJR098CYJR098C 1971 nt4.49□□□□□ -1.69
MSH4P40965 GPI1YGR216C 1830 nt4.49□□□□□ -1.69
MSH4P40965 YBR012W-AYBR012W-A 1323 nt4.48□□□□□ -1.69
MSH4P40965 YOR142W-AYOR142W-A 1323 nt4.48□□□□□ -1.69
MSH4P40965 YPR158W-AYPR158W-A 1323 nt4.48□□□□□ -1.69
MSH4P40965 RPB2YOR151C 3675 nt4.48□□□□□ -1.69
MSH4P40965 MIP6YHR015W 1980 nt4.48□□□□□ -1.69
MSH4P40965 snR65snR65 100 nt4.48□□□□□ -1.69
MSH4P40965 SPG3YDR504C 384 nt4.48□□□□□ -1.69
MSH4P40965 YGR035CYGR035C 351 nt4.48□□□□□ -1.69
MSH4P40965 HIS5YIL116W 1158 nt4.48□□□□□ -1.69
MSH4P40965 YAL004WYAL004W 648 nt4.48□□□□□ -1.69
MSH4P40965 AAR2YBL074C 1068 nt4.48□□□□□ -1.69
MSH4P40965 YOL019W-AYOL019W-A 153 nt4.48□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 21.5 ms