Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.88
ATP6V1AP38606 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.76■■□□□ 1.87
ATP6V1AP38606 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC26.76■■□□□ 1.87
ATP6V1AP38606 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC26.76■■□□□ 1.87
ATP6V1AP38606 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ATP6V1AP38606 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
ATP6V1AP38606 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ATP6V1AP38606 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ATP6V1AP38606 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ATP6V1AP38606 SAPCD2P1-201ENST00000395413 1184 ntBASIC26.76■■□□□ 1.87
ATP6V1AP38606 GXYLT1P3-201ENST00000453058 1193 ntBASIC26.76■■□□□ 1.87
ATP6V1AP38606 SNORA78-201ENST00000459373 127 ntBASIC26.76■■□□□ 1.87
ATP6V1AP38606 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC26.76■■□□□ 1.87
ATP6V1AP38606 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ATP6V1AP38606 REXO2-208ENST00000539754 791 ntTSL 2 BASIC26.76■■□□□ 1.87
ATP6V1AP38606 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
ATP6V1AP38606 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ATP6V1AP38606 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.76■■□□□ 1.87
ATP6V1AP38606 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
ATP6V1AP38606 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC26.76■■□□□ 1.87
ATP6V1AP38606 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
ATP6V1AP38606 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
ATP6V1AP38606 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.76■■□□□ 1.87
ATP6V1AP38606 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
ATP6V1AP38606 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATP6V1AP38606 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATP6V1AP38606 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATP6V1AP38606 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATP6V1AP38606 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATP6V1AP38606 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATP6V1AP38606 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC26.75■■□□□ 1.87
ATP6V1AP38606 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATP6V1AP38606 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC26.75■■□□□ 1.87
ATP6V1AP38606 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
ATP6V1AP38606 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATP6V1AP38606 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATP6V1AP38606 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATP6V1AP38606 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC26.74■■□□□ 1.87
ATP6V1AP38606 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
ATP6V1AP38606 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ATP6V1AP38606 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
ATP6V1AP38606 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ATP6V1AP38606 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ATP6V1AP38606 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ATP6V1AP38606 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
ATP6V1AP38606 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ATP6V1AP38606 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC26.74■■□□□ 1.87
ATP6V1AP38606 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC26.74■■□□□ 1.87
ATP6V1AP38606 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC26.74■■□□□ 1.87
ATP6V1AP38606 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.74■■□□□ 1.87
ATP6V1AP38606 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
ATP6V1AP38606 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ATP6V1AP38606 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC26.73■■□□□ 1.87
ATP6V1AP38606 AC007322.3-201ENST00000426526 701 ntBASIC26.73■■□□□ 1.87
ATP6V1AP38606 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
ATP6V1AP38606 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC26.73■■□□□ 1.87
ATP6V1AP38606 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.73■■□□□ 1.87
ATP6V1AP38606 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
ATP6V1AP38606 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.73■■□□□ 1.87
ATP6V1AP38606 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ATP6V1AP38606 NXN-202ENST00000537628 1340 ntTSL 3 BASIC26.72■■□□□ 1.87
ATP6V1AP38606 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
ATP6V1AP38606 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ATP6V1AP38606 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ATP6V1AP38606 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ATP6V1AP38606 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ATP6V1AP38606 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ATP6V1AP38606 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.72■■□□□ 1.87
ATP6V1AP38606 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.72■■□□□ 1.87
ATP6V1AP38606 CRK-204ENST00000574295 1391 ntTSL 5 BASIC26.71■■□□□ 1.87
ATP6V1AP38606 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC26.71■■□□□ 1.87
ATP6V1AP38606 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC26.71■■□□□ 1.87
ATP6V1AP38606 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
ATP6V1AP38606 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
ATP6V1AP38606 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
ATP6V1AP38606 REXO1L12P-201ENST00000622156 912 ntBASIC26.71■■□□□ 1.87
ATP6V1AP38606 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
ATP6V1AP38606 AC010542.4-201ENST00000563151 1910 ntBASIC26.71■■□□□ 1.87
ATP6V1AP38606 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
ATP6V1AP38606 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC26.7■■□□□ 1.87
ATP6V1AP38606 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ATP6V1AP38606 AC211429.1-201ENST00000415277 523 ntBASIC26.7■■□□□ 1.86
ATP6V1AP38606 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
ATP6V1AP38606 HES2-205ENST00000487437 968 ntTSL 3 BASIC26.7■■□□□ 1.86
ATP6V1AP38606 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
ATP6V1AP38606 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.86
ATP6V1AP38606 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.86
ATP6V1AP38606 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC26.7■■□□□ 1.86
ATP6V1AP38606 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.7■■□□□ 1.86
ATP6V1AP38606 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC26.7■■□□□ 1.86
ATP6V1AP38606 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ATP6V1AP38606 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ATP6V1AP38606 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ATP6V1AP38606 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ATP6V1AP38606 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ATP6V1AP38606 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC26.69■■□□□ 1.86
ATP6V1AP38606 POM121L13P-201ENST00000422362 380 ntBASIC26.69■■□□□ 1.86
ATP6V1AP38606 PTPA-214ENST00000423100 988 ntTSL 2 BASIC26.69■■□□□ 1.86
ATP6V1AP38606 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC26.69■■□□□ 1.86
ATP6V1AP38606 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms