Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTX3P26022 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTX3P26022 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
PTX3P26022 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.96■□□□□ 0.79
PTX3P26022 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTX3P26022 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTX3P26022 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PTX3P26022 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.96■□□□□ 0.79
PTX3P26022 AC010141.2-201ENST00000452426 721 ntBASIC19.96■□□□□ 0.79
PTX3P26022 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTX3P26022 DUX4L2-201ENST00000561772 1275 ntBASIC19.96■□□□□ 0.79
PTX3P26022 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.96■□□□□ 0.79
PTX3P26022 DUX4L6-201ENST00000626483 1275 ntBASIC19.96■□□□□ 0.79
PTX3P26022 DUX4L1-201ENST00000627662 1275 ntBASIC19.96■□□□□ 0.79
PTX3P26022 DUX4L8-201ENST00000629013 1275 ntBASIC19.96■□□□□ 0.79
PTX3P26022 DUX4L3-201ENST00000630187 1275 ntBASIC19.96■□□□□ 0.79
PTX3P26022 DUX4L7-201ENST00000630678 1275 ntBASIC19.96■□□□□ 0.79
PTX3P26022 DUX4L5-201ENST00000630834 1275 ntBASIC19.96■□□□□ 0.79
PTX3P26022 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTX3P26022 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTX3P26022 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.96■□□□□ 0.79
PTX3P26022 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTX3P26022 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTX3P26022 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PTX3P26022 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PTX3P26022 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTX3P26022 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.95■□□□□ 0.78
PTX3P26022 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTX3P26022 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTX3P26022 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTX3P26022 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PTX3P26022 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTX3P26022 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTX3P26022 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTX3P26022 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTX3P26022 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTX3P26022 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.95■□□□□ 0.78
PTX3P26022 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.95■□□□□ 0.78
PTX3P26022 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.95■□□□□ 0.78
PTX3P26022 AP001160.3-201ENST00000601484 763 ntBASIC19.95■□□□□ 0.78
PTX3P26022 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTX3P26022 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTX3P26022 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.95■□□□□ 0.78
PTX3P26022 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTX3P26022 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PTX3P26022 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.94■□□□□ 0.78
PTX3P26022 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTX3P26022 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTX3P26022 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
PTX3P26022 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTX3P26022 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.94■□□□□ 0.78
PTX3P26022 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTX3P26022 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTX3P26022 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTX3P26022 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PTX3P26022 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTX3P26022 KRT16P2-201ENST00000414673 1423 ntBASIC19.93■□□□□ 0.78
PTX3P26022 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.93■□□□□ 0.78
PTX3P26022 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
PTX3P26022 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTX3P26022 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTX3P26022 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTX3P26022 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTX3P26022 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTX3P26022 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.93■□□□□ 0.78
PTX3P26022 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.93■□□□□ 0.78
PTX3P26022 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.93■□□□□ 0.78
PTX3P26022 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTX3P26022 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.93■□□□□ 0.78
PTX3P26022 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTX3P26022 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PTX3P26022 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTX3P26022 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.92■□□□□ 0.78
PTX3P26022 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTX3P26022 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.92■□□□□ 0.78
PTX3P26022 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTX3P26022 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTX3P26022 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.92■□□□□ 0.78
PTX3P26022 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTX3P26022 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.92■□□□□ 0.78
PTX3P26022 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PTX3P26022 AC097381.1-201ENST00000429019 1296 ntBASIC19.92■□□□□ 0.78
PTX3P26022 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.92■□□□□ 0.78
PTX3P26022 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTX3P26022 KRT18P20-201ENST00000548986 1279 ntBASIC19.92■□□□□ 0.78
PTX3P26022 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.92■□□□□ 0.78
PTX3P26022 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTX3P26022 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTX3P26022 AC004854.2-201ENST00000608450 1441 ntBASIC19.92■□□□□ 0.78
PTX3P26022 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTX3P26022 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTX3P26022 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTX3P26022 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.91■□□□□ 0.78
PTX3P26022 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTX3P26022 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTX3P26022 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.91■□□□□ 0.78
PTX3P26022 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
PTX3P26022 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTX3P26022 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.91■□□□□ 0.78
PTX3P26022 MIR6821-201ENST00000617625 74 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms