Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 RPL6BYLR448W 531 nt4.43□□□□□ -1.7
MSH3P25336 DYN3YMR299C 939 nt4.43□□□□□ -1.7
MSH3P25336 YPT53YNL093W 663 nt4.43□□□□□ -1.7
MSH3P25336 NOP15YNL110C 663 nt4.43□□□□□ -1.7
MSH3P25336 YNL184CYNL184C 327 nt4.43□□□□□ -1.7
MSH3P25336 ATX1YNL259C 222 nt4.43□□□□□ -1.7
MSH3P25336 YOR231C-AYOR231C-A 201 nt4.43□□□□□ -1.7
MSH3P25336 FSH3YOR280C 801 nt4.43□□□□□ -1.7
MSH3P25336 MSL5YLR116W 1431 nt4.43□□□□□ -1.7
MSH3P25336 MCM7YBR202W 2538 nt4.43□□□□□ -1.7
MSH3P25336 BI4Q0120 1917 nt4.42□□□□□ -1.7
MSH3P25336 ISW2YOR304W 3363 nt4.42□□□□□ -1.7
MSH3P25336 BRE5YNR051C 1548 nt4.42□□□□□ -1.7
MSH3P25336 SRD1YCR018C 666 nt4.42□□□□□ -1.7
MSH3P25336 YCR090CYCR090C 549 nt4.42□□□□□ -1.7
MSH3P25336 RTR2YDR066C 591 nt4.42□□□□□ -1.7
MSH3P25336 YMR304C-AYMR304C-A 351 nt4.42□□□□□ -1.7
MSH3P25336 RPB2YOR151C 3675 nt4.42□□□□□ -1.7
MSH3P25336 STI1YOR027W 1770 nt4.42□□□□□ -1.7
MSH3P25336 SPC105YGL093W 2754 nt4.42□□□□□ -1.7
MSH3P25336 PPQ1YPL179W 1650 nt4.41□□□□□ -1.7
MSH3P25336 PUB1YNL016W 1362 nt4.41□□□□□ -1.7
MSH3P25336 EXO70YJL085W 1872 nt4.41□□□□□ -1.7
MSH3P25336 NCR1YPL006W 3513 nt4.41□□□□□ -1.7
MSH3P25336 SCY1YGL083W 2415 nt4.41□□□□□ -1.7
MSH3P25336 YGR117CYGR117C 1431 nt4.41□□□□□ -1.7
MSH3P25336 HSP30YCR021C 999 nt4.41□□□□□ -1.7
MSH3P25336 AHC2YCR082W 387 nt4.41□□□□□ -1.7
MSH3P25336 CRG1YHR209W 876 nt4.41□□□□□ -1.7
MSH3P25336 RPA12YJR063W 378 nt4.41□□□□□ -1.7
MSH3P25336 YLR076CYLR076C 423 nt4.41□□□□□ -1.7
MSH3P25336 CGI121YML036W 546 nt4.41□□□□□ -1.7
MSH3P25336 PDR17YNL264C 1053 nt4.41□□□□□ -1.7
MSH3P25336 HUB1YNR032C-A 222 nt4.41□□□□□ -1.7
MSH3P25336 YPL225WYPL225W 441 nt4.41□□□□□ -1.7
MSH3P25336 YPR136CYPR136C 513 nt4.41□□□□□ -1.7
MSH3P25336 GDT1YBR187W 843 nt4.41□□□□□ -1.7
MSH3P25336 DAP2YHR028C 2457 nt4.4□□□□□ -1.7
MSH3P25336 FOX2YKR009C 2703 nt4.4□□□□□ -1.7
MSH3P25336 CHL1YPL008W 2586 nt4.4□□□□□ -1.7
MSH3P25336 RPL11BYGR085C 525 nt4.4□□□□□ -1.71
MSH3P25336 YIL141WYIL141W 390 nt4.4□□□□□ -1.71
MSH3P25336 MRPL38YKL170W 417 nt4.4□□□□□ -1.71
MSH3P25336 YML116W-AYML116W-A 303 nt4.4□□□□□ -1.71
MSH3P25336 IST1YNL265C 897 nt4.4□□□□□ -1.71
MSH3P25336 COQ10YOL008W 624 nt4.4□□□□□ -1.71
MSH3P25336 RPL11AYPR102C 525 nt4.4□□□□□ -1.71
MSH3P25336 YOL019WYOL019W 1656 nt4.4□□□□□ -1.71
MSH3P25336 ASI1YMR119W 1875 nt4.39□□□□□ -1.71
MSH3P25336 YGL088WYGL088W 366 nt4.39□□□□□ -1.71
MSH3P25336 YHL026CYHL026C 948 nt4.39□□□□□ -1.71
MSH3P25336 MAM33YIL070C 801 nt4.39□□□□□ -1.71
MSH3P25336 YBR032WYBR032W 303 nt4.39□□□□□ -1.71
MSH3P25336 KIN2YLR096W 3444 nt4.39□□□□□ -1.71
MSH3P25336 ACE2YLR131C 2313 nt4.39□□□□□ -1.71
MSH3P25336 OAF3YKR064W 2592 nt4.39□□□□□ -1.71
MSH3P25336 SPE1YKL184W 1401 nt4.38□□□□□ -1.71
MSH3P25336 YJL132WYJL132W 2253 nt4.38□□□□□ -1.71
MSH3P25336 KRI1YNL308C 1776 nt4.38□□□□□ -1.71
MSH3P25336 APC5YOR249C 2058 nt4.38□□□□□ -1.71
MSH3P25336 SPI1YER150W 447 nt4.38□□□□□ -1.71
MSH3P25336 FYV4YHR059W 393 nt4.38□□□□□ -1.71
MSH3P25336 NBL1YHR199C-A 222 nt4.38□□□□□ -1.71
MSH3P25336 ABM1YJR108W 372 nt4.38□□□□□ -1.71
MSH3P25336 YJR112W-AYJR112W-A 330 nt4.38□□□□□ -1.71
MSH3P25336 AAR2YBL074C 1068 nt4.38□□□□□ -1.71
MSH3P25336 PEX6YNL329C 3093 nt4.38□□□□□ -1.71
MSH3P25336 UTP25YIL091C 2166 nt4.37□□□□□ -1.71
MSH3P25336 RPS14AYCR031C 414 nt4.37□□□□□ -1.71
MSH3P25336 FMN1YDR236C 657 nt4.37□□□□□ -1.71
MSH3P25336 YJR079WYJR079W 330 nt4.37□□□□□ -1.71
MSH3P25336 RPS4AYJR145C 786 nt4.37□□□□□ -1.71
MSH3P25336 YLR269CYLR269C 351 nt4.37□□□□□ -1.71
MSH3P25336 SRL1YOR247W 633 nt4.37□□□□□ -1.71
MSH3P25336 MLH2YLR035C 2088 nt4.37□□□□□ -1.71
MSH3P25336 RPN6YDL097C 1305 nt4.37□□□□□ -1.71
MSH3P25336 XRS2YDR369C 2565 nt4.37□□□□□ -1.71
MSH3P25336 SEN54YPL083C 1404 nt4.37□□□□□ -1.71
MSH3P25336 DSF2YBR007C 2211 nt4.36□□□□□ -1.71
MSH3P25336 YDL071CYDL071C 375 nt4.36□□□□□ -1.71
MSH3P25336 OPI6YDL096C 327 nt4.36□□□□□ -1.71
MSH3P25336 YDR149CYDR149C 708 nt4.36□□□□□ -1.71
MSH3P25336 YMR031W-AYMR031W-A 327 nt4.36□□□□□ -1.71
MSH3P25336 IRC16YPR038W 360 nt4.36□□□□□ -1.71
MSH3P25336 snR35snR35 204 nt4.36□□□□□ -1.71
MSH3P25336 RIM13YMR154C 2184 nt4.36□□□□□ -1.71
MSH3P25336 FRT2YAL028W 1587 nt4.36□□□□□ -1.71
MSH3P25336 MIP6YHR015W 1980 nt4.35□□□□□ -1.71
MSH3P25336 YDL009CYDL009C 324 nt4.35□□□□□ -1.71
MSH3P25336 YGR035CYGR035C 351 nt4.35□□□□□ -1.71
MSH3P25336 PXR1YGR280C 816 nt4.35□□□□□ -1.71
MSH3P25336 YKL118WYKL118W 312 nt4.35□□□□□ -1.71
MSH3P25336 YAL063C-AYAL063C-A 291 nt4.35□□□□□ -1.71
MSH3P25336 PAM18YLR008C 507 nt4.35□□□□□ -1.71
MSH3P25336 PKR1YMR123W 369 nt4.35□□□□□ -1.71
MSH3P25336 YAF9YNL107W 681 nt4.35□□□□□ -1.71
MSH3P25336 YRR1YOR162C 2433 nt4.35□□□□□ -1.71
MSH3P25336 SEG1YMR086W 2883 nt4.35□□□□□ -1.71
MSH3P25336 PIN4YBL051C 2007 nt4.34□□□□□ -1.71
MSH3P25336 ECO1YFR027W 846 nt4.34□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 19.6 ms