Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC25.18■■□□□ 1.62
CHGBP05060 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CHGBP05060 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CHGBP05060 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
CHGBP05060 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
CHGBP05060 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHGBP05060 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC25.17■■□□□ 1.62
CHGBP05060 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHGBP05060 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC25.17■■□□□ 1.62
CHGBP05060 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHGBP05060 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHGBP05060 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.17■■□□□ 1.62
CHGBP05060 MAP2K4P1-201ENST00000438453 1195 ntBASIC25.17■■□□□ 1.62
CHGBP05060 AC026185.1-201ENST00000445748 174 ntBASIC25.17■■□□□ 1.62
CHGBP05060 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25.17■■□□□ 1.62
CHGBP05060 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
CHGBP05060 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
CHGBP05060 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHGBP05060 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
CHGBP05060 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25.16■■□□□ 1.62
CHGBP05060 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHGBP05060 MIR663A-201ENST00000385250 93 ntBASIC25.16■■□□□ 1.62
CHGBP05060 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC25.16■■□□□ 1.62
CHGBP05060 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHGBP05060 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.16■■□□□ 1.62
CHGBP05060 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHGBP05060 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHGBP05060 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC25.16■■□□□ 1.62
CHGBP05060 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHGBP05060 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHGBP05060 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHGBP05060 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC25.15■■□□□ 1.62
CHGBP05060 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
CHGBP05060 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHGBP05060 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC25.15■■□□□ 1.62
CHGBP05060 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC25.15■■□□□ 1.62
CHGBP05060 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC25.15■■□□□ 1.62
CHGBP05060 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC25.15■■□□□ 1.62
CHGBP05060 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHGBP05060 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC25.15■■□□□ 1.62
CHGBP05060 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
CHGBP05060 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHGBP05060 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHGBP05060 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.15■■□□□ 1.62
CHGBP05060 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHGBP05060 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC25.14■■□□□ 1.62
CHGBP05060 AC068338.2-201ENST00000563278 1430 ntBASIC25.14■■□□□ 1.62
CHGBP05060 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CHGBP05060 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.14■■□□□ 1.62
CHGBP05060 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
CHGBP05060 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CHGBP05060 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC25.14■■□□□ 1.62
CHGBP05060 PPP1R14BP3-201ENST00000509033 445 ntBASIC25.14■■□□□ 1.62
CHGBP05060 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC25.14■■□□□ 1.62
CHGBP05060 GXYLT1P5-201ENST00000614548 1189 ntBASIC25.14■■□□□ 1.62
CHGBP05060 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC25.14■■□□□ 1.61
CHGBP05060 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CHGBP05060 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC25.14■■□□□ 1.61
CHGBP05060 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
CHGBP05060 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC25.14■■□□□ 1.61
CHGBP05060 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CHGBP05060 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CHGBP05060 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CHGBP05060 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHGBP05060 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CHGBP05060 AC091799.1-201ENST00000422823 811 ntBASIC25.13■■□□□ 1.61
CHGBP05060 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
CHGBP05060 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
CHGBP05060 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CHGBP05060 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC25.13■■□□□ 1.61
CHGBP05060 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHGBP05060 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC25.12■■□□□ 1.61
CHGBP05060 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CHGBP05060 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CHGBP05060 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.12■■□□□ 1.61
CHGBP05060 AC016405.3-201ENST00000607710 860 ntBASIC25.12■■□□□ 1.61
CHGBP05060 AC120498.10-201ENST00000621827 505 ntBASIC25.12■■□□□ 1.61
CHGBP05060 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHGBP05060 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHGBP05060 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHGBP05060 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.12■■□□□ 1.61
CHGBP05060 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHGBP05060 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC25.12■■□□□ 1.61
CHGBP05060 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CHGBP05060 CLDN5-201ENST00000403084 2357 ntBASIC25.11■■□□□ 1.61
CHGBP05060 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CHGBP05060 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CHGBP05060 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CHGBP05060 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC25.11■■□□□ 1.61
CHGBP05060 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC25.11■■□□□ 1.61
CHGBP05060 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC25.11■■□□□ 1.61
CHGBP05060 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CHGBP05060 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.11■■□□□ 1.61
CHGBP05060 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25.11■■□□□ 1.61
CHGBP05060 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC25.11■■□□□ 1.61
CHGBP05060 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC25.11■■□□□ 1.61
CHGBP05060 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC25.11■■□□□ 1.61
CHGBP05060 TK2-208ENST00000545043 1120 ntTSL 2 BASIC25.11■■□□□ 1.61
CHGBP05060 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.11■■□□□ 1.61
CHGBP05060 WT1-AS_3.1-201ENST00000613262 234 ntBASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms