Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 ADY4YLR227C 1482 nt3.81□□□□□ -1.8
CDC9P04819 YDL228CYDL228C 642 nt3.81□□□□□ -1.8
CDC9P04819 RPL15AYLR029C 615 nt3.81□□□□□ -1.8
CDC9P04819 ILV5YLR355C 1188 nt3.81□□□□□ -1.8
CDC9P04819 YPR059CYPR059C 387 nt3.81□□□□□ -1.8
CDC9P04819 UBP5YER144C 2418 nt3.81□□□□□ -1.8
CDC9P04819 SSH1YBR283C 1473 nt3.8□□□□□ -1.8
CDC9P04819 FAS2YPL231W 5664 nt3.8□□□□□ -1.8
CDC9P04819 RSM24YDR175C 960 nt3.8□□□□□ -1.8
CDC9P04819 IES5YER092W 378 nt3.8□□□□□ -1.8
CDC9P04819 AIM11YER093C-A 414 nt3.8□□□□□ -1.8
CDC9P04819 SEC53YFL045C 765 nt3.8□□□□□ -1.8
CDC9P04819 ECM4YKR076W 1113 nt3.8□□□□□ -1.8
CDC9P04819 COX8YLR395C 237 nt3.8□□□□□ -1.8
CDC9P04819 RHO5YNL180C 996 nt3.8□□□□□ -1.8
CDC9P04819 SUI1YNL244C 327 nt3.8□□□□□ -1.8
CDC9P04819 ARR2YPR200C 393 nt3.8□□□□□ -1.8
CDC9P04819 MRPS9YBR146W 837 nt3.8□□□□□ -1.8
CDC9P04819 BI4Q0120 1917 nt3.8□□□□□ -1.8
CDC9P04819 YDL176WYDL176W 2127 nt3.79□□□□□ -1.8
CDC9P04819 GAL11YOL051W 3246 nt3.79□□□□□ -1.8
CDC9P04819 RPL1BYGL135W 654 nt3.79□□□□□ -1.8
CDC9P04819 BIO2YGR286C 1128 nt3.79□□□□□ -1.8
CDC9P04819 HIS5YIL116W 1158 nt3.79□□□□□ -1.8
CDC9P04819 DAD2YKR083C 402 nt3.79□□□□□ -1.8
CDC9P04819 YLR406C-AYLR406C-A 150 nt3.79□□□□□ -1.8
CDC9P04819 RPL1AYPL220W 654 nt3.79□□□□□ -1.8
CDC9P04819 AIM4YBR194W 372 nt3.79□□□□□ -1.8
CDC9P04819 CCM1YGR150C 2595 nt3.79□□□□□ -1.8
CDC9P04819 HOP1YIL072W 1818 nt3.79□□□□□ -1.8
CDC9P04819 PTA1YAL043C 2358 nt3.78□□□□□ -1.8
CDC9P04819 21S_rRNA21S_rRNA 3296 nt3.78□□□□□ -1.8
CDC9P04819 TOP1YOL006C 2310 nt3.78□□□□□ -1.8
CDC9P04819 HFM1YGL251C 3564 nt3.78□□□□□ -1.8
CDC9P04819 YDR246W-AYDR246W-A 201 nt3.78□□□□□ -1.8
CDC9P04819 YEL032C-AYEL032C-A 162 nt3.78□□□□□ -1.8
CDC9P04819 RTS3YGR161C 792 nt3.78□□□□□ -1.8
CDC9P04819 SDH3YKL141W 597 nt3.78□□□□□ -1.8
CDC9P04819 NKP2YLR315W 462 nt3.78□□□□□ -1.8
CDC9P04819 YMR013C-AYMR013C-A 150 nt3.78□□□□□ -1.8
CDC9P04819 YMR153C-AYMR153C-A 336 nt3.78□□□□□ -1.8
CDC9P04819 CAT5YOR125C 702 nt3.78□□□□□ -1.8
CDC9P04819 YOR277CYOR277C 309 nt3.78□□□□□ -1.8
CDC9P04819 YPR053CYPR053C 456 nt3.78□□□□□ -1.8
CDC9P04819 NTC20YBR188C 423 nt3.78□□□□□ -1.8
CDC9P04819 SPT23YKL020C 3249 nt3.78□□□□□ -1.8
CDC9P04819 IOC2YLR095C 2439 nt3.78□□□□□ -1.81
CDC9P04819 NOC2YOR206W 2133 nt3.77□□□□□ -1.81
CDC9P04819 RAD1YPL022W 3303 nt3.77□□□□□ -1.81
CDC9P04819 TRS85YDR108W 2097 nt3.77□□□□□ -1.81
CDC9P04819 SRB4YER022W 2064 nt3.77□□□□□ -1.81
CDC9P04819 HAA1YPR008W 2085 nt3.77□□□□□ -1.81
CDC9P04819 RNR1YER070W 2667 nt3.77□□□□□ -1.81
CDC9P04819 YDL009CYDL009C 324 nt3.77□□□□□ -1.81
CDC9P04819 RTR2YDR066C 591 nt3.77□□□□□ -1.81
CDC9P04819 API2YDR525W 330 nt3.77□□□□□ -1.81
CDC9P04819 BIG1YHR101C 1008 nt3.77□□□□□ -1.81
CDC9P04819 RDN5-1RDN5-1 121 nt3.77□□□□□ -1.81
CDC9P04819 IES3YLR052W 753 nt3.77□□□□□ -1.81
CDC9P04819 RDN5-6RDN5-6 121 nt3.77□□□□□ -1.81
CDC9P04819 CWC24YLR323C 780 nt3.77□□□□□ -1.81
CDC9P04819 ASC1YMR116C 960 nt3.77□□□□□ -1.81
CDC9P04819 RIO2YNL207W 1278 nt3.77□□□□□ -1.81
CDC9P04819 PIS1YPR113W 663 nt3.77□□□□□ -1.81
CDC9P04819 CEP3YMR168C 1827 nt3.77□□□□□ -1.81
CDC9P04819 PPN1YDR452W 2025 nt3.77□□□□□ -1.81
CDC9P04819 YDL094CYDL094C 510 nt3.76□□□□□ -1.81
CDC9P04819 YDR526CYDR526C 471 nt3.76□□□□□ -1.81
CDC9P04819 RTT105YER104W 627 nt3.76□□□□□ -1.81
CDC9P04819 GET1YGL020C 708 nt3.76□□□□□ -1.81
CDC9P04819 YGR053CYGR053C 852 nt3.76□□□□□ -1.81
CDC9P04819 YAL031W-AYAL031W-A 309 nt3.76□□□□□ -1.81
CDC9P04819 ADI1YMR009W 540 nt3.76□□□□□ -1.81
CDC9P04819 YMR304C-AYMR304C-A 351 nt3.76□□□□□ -1.81
CDC9P04819 snR54snR54 86 nt3.76□□□□□ -1.81
CDC9P04819 PIM1YBL022C 3402 nt3.76□□□□□ -1.81
CDC9P04819 VHS3YOR054C 2025 nt3.76□□□□□ -1.81
CDC9P04819 CHS3YBR023C 3498 nt3.76□□□□□ -1.81
CDC9P04819 CIN1YOR349W 3045 nt3.76□□□□□ -1.81
CDC9P04819 MUS81YDR386W 1899 nt3.75□□□□□ -1.81
CDC9P04819 CBP2YHL038C 1893 nt3.75□□□□□ -1.81
CDC9P04819 COP1YDL145C 3606 nt3.75□□□□□ -1.81
CDC9P04819 VMA1YDL185W 3216 nt3.75□□□□□ -1.81
CDC9P04819 YKL222CYKL222C 2118 nt3.75□□□□□ -1.81
CDC9P04819 YKR078WYKR078W 1758 nt3.75□□□□□ -1.81
CDC9P04819 YEL1YBL060W 2064 nt3.75□□□□□ -1.81
CDC9P04819 PAM1YDR251W 2493 nt3.75□□□□□ -1.81
CDC9P04819 GSC2YGR032W 5688 nt3.74□□□□□ -1.81
CDC9P04819 SPC1YJR010C-A 285 nt3.74□□□□□ -1.81
CDC9P04819 ACE2YLR131C 2313 nt3.74□□□□□ -1.81
CDC9P04819 ECM16YMR128W 3804 nt3.74□□□□□ -1.81
CDC9P04819 PEX11YOL147C 711 nt3.74□□□□□ -1.81
CDC9P04819 LEE1YPL054W 906 nt3.74□□□□□ -1.81
CDC9P04819 ALG14YBR070C 714 nt3.74□□□□□ -1.81
CDC9P04819 SYT1YPR095C 3681 nt3.74□□□□□ -1.81
CDC9P04819 PHO81YGR233C 3537 nt3.74□□□□□ -1.81
CDC9P04819 ATG2YNL242W 4779 nt3.73□□□□□ -1.81
CDC9P04819 MSK1YNL073W 1731 nt3.73□□□□□ -1.81
CDC9P04819 ICR1ICR1 3199 nt3.73□□□□□ -1.81
CDC9P04819 YDR149CYDR149C 708 nt3.73□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 56.2 ms