Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TSPAN3O60637 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TSPAN3O60637 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TSPAN3O60637 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.51■■□□□ 1.03
TSPAN3O60637 AC245052.3-201ENST00000450182 901 ntBASIC21.51■■□□□ 1.03
TSPAN3O60637 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.51■■□□□ 1.03
TSPAN3O60637 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.51■■□□□ 1.03
TSPAN3O60637 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TSPAN3O60637 AC016405.3-201ENST00000607710 860 ntBASIC21.51■■□□□ 1.03
TSPAN3O60637 AC243732.1-201ENST00000612648 864 ntBASIC21.51■■□□□ 1.03
TSPAN3O60637 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.51■■□□□ 1.03
TSPAN3O60637 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TSPAN3O60637 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TSPAN3O60637 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TSPAN3O60637 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TSPAN3O60637 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TSPAN3O60637 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TSPAN3O60637 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
TSPAN3O60637 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
TSPAN3O60637 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
TSPAN3O60637 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSPAN3O60637 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSPAN3O60637 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.5■■□□□ 1.03
TSPAN3O60637 SLC29A4P1-201ENST00000398760 971 ntBASIC21.5■■□□□ 1.03
TSPAN3O60637 GUSBP6-202ENST00000438529 1198 ntBASIC21.5■■□□□ 1.03
TSPAN3O60637 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.5■■□□□ 1.03
TSPAN3O60637 AC133552.2-202ENST00000575694 574 ntBASIC21.5■■□□□ 1.03
TSPAN3O60637 AL591742.1-201ENST00000604433 565 ntBASIC21.5■■□□□ 1.03
TSPAN3O60637 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.5■■□□□ 1.03
TSPAN3O60637 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.5■■□□□ 1.03
TSPAN3O60637 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.5■■□□□ 1.03
TSPAN3O60637 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TSPAN3O60637 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN3O60637 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN3O60637 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN3O60637 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.49■■□□□ 1.03
TSPAN3O60637 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN3O60637 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN3O60637 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TSPAN3O60637 AC093787.1-201ENST00000450396 207 ntBASIC21.49■■□□□ 1.03
TSPAN3O60637 AL138781.1-201ENST00000566567 1274 ntBASIC21.49■■□□□ 1.03
TSPAN3O60637 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN3O60637 AC008694.1-202ENST00000636953 945 ntBASIC21.49■■□□□ 1.03
TSPAN3O60637 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN3O60637 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN3O60637 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
TSPAN3O60637 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.49■■□□□ 1.03
TSPAN3O60637 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TSPAN3O60637 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
TSPAN3O60637 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.48■■□□□ 1.03
TSPAN3O60637 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TSPAN3O60637 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
TSPAN3O60637 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.48■■□□□ 1.03
TSPAN3O60637 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TSPAN3O60637 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TSPAN3O60637 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.48■■□□□ 1.03
TSPAN3O60637 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.48■■□□□ 1.03
TSPAN3O60637 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TSPAN3O60637 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TSPAN3O60637 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TSPAN3O60637 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TSPAN3O60637 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
TSPAN3O60637 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TSPAN3O60637 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TSPAN3O60637 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TSPAN3O60637 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TSPAN3O60637 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.47■■□□□ 1.03
TSPAN3O60637 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TSPAN3O60637 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TSPAN3O60637 AC091799.1-201ENST00000422823 811 ntBASIC21.47■■□□□ 1.03
TSPAN3O60637 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.47■■□□□ 1.03
TSPAN3O60637 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.47■■□□□ 1.03
TSPAN3O60637 AC069236.1-201ENST00000604339 616 ntBASIC21.47■■□□□ 1.03
TSPAN3O60637 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TSPAN3O60637 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TSPAN3O60637 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TSPAN3O60637 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
TSPAN3O60637 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TSPAN3O60637 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TSPAN3O60637 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TSPAN3O60637 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TSPAN3O60637 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
TSPAN3O60637 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TSPAN3O60637 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TSPAN3O60637 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TSPAN3O60637 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
TSPAN3O60637 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TSPAN3O60637 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.46■■□□□ 1.03
TSPAN3O60637 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.46■■□□□ 1.03
TSPAN3O60637 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TSPAN3O60637 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TSPAN3O60637 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.46■■□□□ 1.03
TSPAN3O60637 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TSPAN3O60637 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TSPAN3O60637 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TSPAN3O60637 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TSPAN3O60637 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.46■■□□□ 1.03
TSPAN3O60637 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TSPAN3O60637 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TSPAN3O60637 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms