Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
GMDSO60547 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.36■□□□□ 0.53
GMDSO60547 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.36■□□□□ 0.53
GMDSO60547 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.36■□□□□ 0.53
GMDSO60547 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.36■□□□□ 0.53
GMDSO60547 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.36■□□□□ 0.53
GMDSO60547 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
GMDSO60547 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.36■□□□□ 0.53
GMDSO60547 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GMDSO60547 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.36■□□□□ 0.53
GMDSO60547 SMUG1P1-201ENST00000590640 811 ntBASIC18.36■□□□□ 0.53
GMDSO60547 AC105233.4-201ENST00000642045 216 ntBASIC18.36■□□□□ 0.53
GMDSO60547 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GMDSO60547 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GMDSO60547 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.35■□□□□ 0.53
GMDSO60547 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GMDSO60547 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GMDSO60547 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
GMDSO60547 FEM1AP1-201ENST00000431297 1995 ntBASIC18.35■□□□□ 0.53
GMDSO60547 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GMDSO60547 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GMDSO60547 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
GMDSO60547 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
GMDSO60547 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.35■□□□□ 0.53
GMDSO60547 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GMDSO60547 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GMDSO60547 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GMDSO60547 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GMDSO60547 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GMDSO60547 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.34■□□□□ 0.53
GMDSO60547 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.34■□□□□ 0.53
GMDSO60547 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.34■□□□□ 0.53
GMDSO60547 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GMDSO60547 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.34■□□□□ 0.53
GMDSO60547 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GMDSO60547 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GMDSO60547 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GMDSO60547 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GMDSO60547 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
GMDSO60547 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GMDSO60547 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GMDSO60547 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GMDSO60547 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.34■□□□□ 0.53
GMDSO60547 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.34■□□□□ 0.53
GMDSO60547 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.34■□□□□ 0.53
GMDSO60547 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.34■□□□□ 0.53
GMDSO60547 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GMDSO60547 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
GMDSO60547 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
GMDSO60547 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.34■□□□□ 0.53
GMDSO60547 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GMDSO60547 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.34■□□□□ 0.53
GMDSO60547 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GMDSO60547 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GMDSO60547 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GMDSO60547 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
GMDSO60547 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
GMDSO60547 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GMDSO60547 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.33■□□□□ 0.53
GMDSO60547 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
GMDSO60547 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.33■□□□□ 0.53
GMDSO60547 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GMDSO60547 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GMDSO60547 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.33■□□□□ 0.52
GMDSO60547 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.33■□□□□ 0.52
GMDSO60547 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.33■□□□□ 0.52
GMDSO60547 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GMDSO60547 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GMDSO60547 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
GMDSO60547 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GMDSO60547 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.33■□□□□ 0.52
GMDSO60547 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.33■□□□□ 0.52
GMDSO60547 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GMDSO60547 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.33■□□□□ 0.52
GMDSO60547 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GMDSO60547 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GMDSO60547 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.33■□□□□ 0.52
GMDSO60547 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.32■□□□□ 0.52
GMDSO60547 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
GMDSO60547 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GMDSO60547 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GMDSO60547 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GMDSO60547 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.32■□□□□ 0.52
GMDSO60547 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GMDSO60547 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GMDSO60547 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.32■□□□□ 0.52
GMDSO60547 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
GMDSO60547 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GMDSO60547 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.32■□□□□ 0.52
GMDSO60547 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.32■□□□□ 0.52
GMDSO60547 AC105265.2-201ENST00000467189 838 ntBASIC18.32■□□□□ 0.52
GMDSO60547 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.32■□□□□ 0.52
GMDSO60547 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
GMDSO60547 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.32■□□□□ 0.52
GMDSO60547 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.32■□□□□ 0.52
GMDSO60547 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
GMDSO60547 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.32■□□□□ 0.52
GMDSO60547 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.32■□□□□ 0.52
GMDSO60547 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GMDSO60547 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms