Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.81■□□□□ 0.28
CUBNO60494 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.81■□□□□ 0.28
CUBNO60494 AL353708.3-201ENST00000610272 989 ntBASIC16.81■□□□□ 0.28
CUBNO60494 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CUBNO60494 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CUBNO60494 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CUBNO60494 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CUBNO60494 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CUBNO60494 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.81■□□□□ 0.28
CUBNO60494 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.81■□□□□ 0.28
CUBNO60494 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CUBNO60494 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CUBNO60494 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CUBNO60494 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CUBNO60494 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.81■□□□□ 0.28
CUBNO60494 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CUBNO60494 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.81■□□□□ 0.28
CUBNO60494 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CUBNO60494 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CUBNO60494 POM121L13P-201ENST00000422362 380 ntBASIC16.8■□□□□ 0.28
CUBNO60494 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CUBNO60494 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.8■□□□□ 0.28
CUBNO60494 AC087742.1-201ENST00000575880 1738 ntBASIC16.8■□□□□ 0.28
CUBNO60494 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CUBNO60494 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CUBNO60494 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
CUBNO60494 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CUBNO60494 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CUBNO60494 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CUBNO60494 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CUBNO60494 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CUBNO60494 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CUBNO60494 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CUBNO60494 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CUBNO60494 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CUBNO60494 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CUBNO60494 OR7E47P-201ENST00000546390 1422 ntBASIC16.8■□□□□ 0.28
CUBNO60494 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUBNO60494 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.79■□□□□ 0.28
CUBNO60494 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CUBNO60494 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.79■□□□□ 0.28
CUBNO60494 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.79■□□□□ 0.28
CUBNO60494 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUBNO60494 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CUBNO60494 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUBNO60494 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUBNO60494 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.79■□□□□ 0.28
CUBNO60494 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CUBNO60494 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.79■□□□□ 0.28
CUBNO60494 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CUBNO60494 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.79■□□□□ 0.28
CUBNO60494 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CUBNO60494 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CUBNO60494 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.79■□□□□ 0.28
CUBNO60494 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.79■□□□□ 0.28
CUBNO60494 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.79■□□□□ 0.28
CUBNO60494 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.79■□□□□ 0.28
CUBNO60494 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUBNO60494 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUBNO60494 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.79■□□□□ 0.28
CUBNO60494 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUBNO60494 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CUBNO60494 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.78■□□□□ 0.28
CUBNO60494 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.78■□□□□ 0.28
CUBNO60494 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.78■□□□□ 0.28
CUBNO60494 AL023875.1-201ENST00000640777 796 ntBASIC16.78■□□□□ 0.28
CUBNO60494 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.78■□□□□ 0.28
CUBNO60494 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.78■□□□□ 0.28
CUBNO60494 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.78■□□□□ 0.28
CUBNO60494 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CUBNO60494 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CUBNO60494 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.78■□□□□ 0.28
CUBNO60494 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CUBNO60494 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CUBNO60494 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CUBNO60494 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CUBNO60494 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CUBNO60494 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CUBNO60494 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CUBNO60494 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CUBNO60494 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CUBNO60494 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.78■□□□□ 0.28
CUBNO60494 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CUBNO60494 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CUBNO60494 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CUBNO60494 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.77■□□□□ 0.28
CUBNO60494 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
CUBNO60494 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.77■□□□□ 0.28
CUBNO60494 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CUBNO60494 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.77■□□□□ 0.28
CUBNO60494 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CUBNO60494 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CUBNO60494 POU5F1P4-201ENST00000413175 1085 ntBASIC16.77■□□□□ 0.28
CUBNO60494 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.77■□□□□ 0.28
CUBNO60494 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
CUBNO60494 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CUBNO60494 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CUBNO60494 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.77■□□□□ 0.27
CUBNO60494 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CUBNO60494 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms