Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.43■□□□□ 0.7
PRKNO60260 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PRKNO60260 AC120498.10-201ENST00000621827 505 ntBASIC19.43■□□□□ 0.7
PRKNO60260 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.43■□□□□ 0.7
PRKNO60260 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PRKNO60260 KRT16P2-201ENST00000414673 1423 ntBASIC19.42■□□□□ 0.7
PRKNO60260 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRKNO60260 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRKNO60260 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRKNO60260 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRKNO60260 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRKNO60260 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRKNO60260 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRKNO60260 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PRKNO60260 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRKNO60260 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRKNO60260 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.42■□□□□ 0.7
PRKNO60260 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.42■□□□□ 0.7
PRKNO60260 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.42■□□□□ 0.7
PRKNO60260 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.42■□□□□ 0.7
PRKNO60260 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PRKNO60260 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.42■□□□□ 0.7
PRKNO60260 AL024507.2-201ENST00000606070 2574 ntBASIC19.42■□□□□ 0.7
PRKNO60260 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.42■□□□□ 0.7
PRKNO60260 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRKNO60260 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.42■□□□□ 0.7
PRKNO60260 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRKNO60260 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRKNO60260 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRKNO60260 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.41■□□□□ 0.7
PRKNO60260 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.41■□□□□ 0.7
PRKNO60260 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRKNO60260 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.41■□□□□ 0.7
PRKNO60260 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.41■□□□□ 0.7
PRKNO60260 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.41■□□□□ 0.7
PRKNO60260 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.41■□□□□ 0.7
PRKNO60260 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.41■□□□□ 0.7
PRKNO60260 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRKNO60260 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.4■□□□□ 0.7
PRKNO60260 MIR663A-201ENST00000385250 93 ntBASIC19.4■□□□□ 0.7
PRKNO60260 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.4■□□□□ 0.7
PRKNO60260 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRKNO60260 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.4■□□□□ 0.7
PRKNO60260 TERF1P5-201ENST00000477545 1207 ntBASIC19.4■□□□□ 0.7
PRKNO60260 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.4■□□□□ 0.7
PRKNO60260 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.4■□□□□ 0.7
PRKNO60260 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.4■□□□□ 0.7
PRKNO60260 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.4■□□□□ 0.7
PRKNO60260 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PRKNO60260 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRKNO60260 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.4■□□□□ 0.7
PRKNO60260 AL050303.2-201ENST00000619798 666 ntBASIC19.4■□□□□ 0.7
PRKNO60260 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRKNO60260 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRKNO60260 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PRKNO60260 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRKNO60260 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRKNO60260 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRKNO60260 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRKNO60260 AC005229.4-201ENST00000610085 2198 ntBASIC19.39■□□□□ 0.69
PRKNO60260 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PRKNO60260 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PRKNO60260 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PRKNO60260 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRKNO60260 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRKNO60260 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRKNO60260 AC007322.1-201ENST00000426983 750 ntBASIC19.39■□□□□ 0.69
PRKNO60260 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRKNO60260 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.39■□□□□ 0.69
PRKNO60260 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRKNO60260 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.39■□□□□ 0.69
PRKNO60260 AC231657.2-201ENST00000624556 255 ntBASIC19.39■□□□□ 0.69
PRKNO60260 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.39■□□□□ 0.69
PRKNO60260 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
PRKNO60260 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRKNO60260 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRKNO60260 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.39■□□□□ 0.69
PRKNO60260 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRKNO60260 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRKNO60260 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PRKNO60260 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.39■□□□□ 0.69
PRKNO60260 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.39■□□□□ 0.69
PRKNO60260 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.39■□□□□ 0.69
PRKNO60260 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PRKNO60260 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRKNO60260 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PRKNO60260 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRKNO60260 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRKNO60260 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.38■□□□□ 0.69
PRKNO60260 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.38■□□□□ 0.69
PRKNO60260 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.38■□□□□ 0.69
PRKNO60260 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRKNO60260 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.38■□□□□ 0.69
PRKNO60260 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.38■□□□□ 0.69
PRKNO60260 RBM17P2-201ENST00000616397 1405 ntBASIC19.38■□□□□ 0.69
PRKNO60260 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
PRKNO60260 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRKNO60260 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PRKNO60260 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.37■□□□□ 0.69
PRKNO60260 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms