Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC28A2O43868 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC28A2O43868 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC28A2O43868 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC28A2O43868 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC28A2O43868 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC28A2O43868 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC28A2O43868 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.04■□□□□ 0.8
SLC28A2O43868 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC28A2O43868 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC28A2O43868 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC28A2O43868 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SLC28A2O43868 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC28A2O43868 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC28A2O43868 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC28A2O43868 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SLC28A2O43868 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SLC28A2O43868 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC28A2O43868 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC28A2O43868 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC28A2O43868 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC28A2O43868 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC28A2O43868 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC28A2O43868 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SLC28A2O43868 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC28A2O43868 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SLC28A2O43868 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC28A2O43868 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.02■□□□□ 0.8
SLC28A2O43868 BX005040.4-201ENST00000637145 1518 ntBASIC20.02■□□□□ 0.8
SLC28A2O43868 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC28A2O43868 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC28A2O43868 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC28A2O43868 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.02■□□□□ 0.8
SLC28A2O43868 SMUG1P1-201ENST00000590640 811 ntBASIC20.02■□□□□ 0.8
SLC28A2O43868 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
SLC28A2O43868 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.02■□□□□ 0.8
SLC28A2O43868 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC28A2O43868 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SLC28A2O43868 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC28A2O43868 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC28A2O43868 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SLC28A2O43868 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.02■□□□□ 0.79
SLC28A2O43868 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC28A2O43868 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.01■□□□□ 0.79
SLC28A2O43868 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC28A2O43868 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC28A2O43868 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC28A2O43868 AC073210.2-201ENST00000430369 194 ntBASIC20.01■□□□□ 0.79
SLC28A2O43868 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC28A2O43868 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.01■□□□□ 0.79
SLC28A2O43868 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC28A2O43868 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SLC28A2O43868 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC28A2O43868 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC28A2O43868 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SLC28A2O43868 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC28A2O43868 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SLC28A2O43868 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
SLC28A2O43868 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC28A2O43868 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SLC28A2O43868 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20■□□□□ 0.79
SLC28A2O43868 AC026471.6-201ENST00000622954 1905 ntBASIC20■□□□□ 0.79
SLC28A2O43868 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC28A2O43868 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20■□□□□ 0.79
SLC28A2O43868 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC28A2O43868 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
SLC28A2O43868 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20■□□□□ 0.79
SLC28A2O43868 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20■□□□□ 0.79
SLC28A2O43868 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20■□□□□ 0.79
SLC28A2O43868 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SLC28A2O43868 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SLC28A2O43868 OXCT2P1-201ENST00000447263 1535 ntBASIC20■□□□□ 0.79
SLC28A2O43868 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
SLC28A2O43868 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20■□□□□ 0.79
SLC28A2O43868 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC28A2O43868 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SLC28A2O43868 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SLC28A2O43868 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC28A2O43868 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SLC28A2O43868 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC28A2O43868 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC28A2O43868 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC28A2O43868 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC28A2O43868 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC28A2O43868 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SLC28A2O43868 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC28A2O43868 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SLC28A2O43868 AC079140.4-201ENST00000507448 529 ntBASIC19.99■□□□□ 0.79
SLC28A2O43868 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC28A2O43868 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.99■□□□□ 0.79
SLC28A2O43868 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC28A2O43868 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC28A2O43868 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC28A2O43868 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC28A2O43868 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC28A2O43868 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC28A2O43868 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC28A2O43868 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC28A2O43868 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC28A2O43868 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms