Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
SNAI2O43623 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
SNAI2O43623 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNAI2O43623 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC15.51■□□□□ 0.07
SNAI2O43623 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.51■□□□□ 0.07
SNAI2O43623 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNAI2O43623 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNAI2O43623 OR2I1P-207ENST00000453522 948 ntBASIC15.51■□□□□ 0.07
SNAI2O43623 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.51■□□□□ 0.07
SNAI2O43623 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.51■□□□□ 0.07
SNAI2O43623 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNAI2O43623 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNAI2O43623 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNAI2O43623 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.51■□□□□ 0.07
SNAI2O43623 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SNAI2O43623 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNAI2O43623 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SNAI2O43623 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNAI2O43623 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SNAI2O43623 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SNAI2O43623 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNAI2O43623 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.51■□□□□ 0.07
SNAI2O43623 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNAI2O43623 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNAI2O43623 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNAI2O43623 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNAI2O43623 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SNAI2O43623 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNAI2O43623 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SNAI2O43623 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
SNAI2O43623 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNAI2O43623 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SNAI2O43623 AC010141.3-201ENST00000456659 717 ntBASIC15.5■□□□□ 0.07
SNAI2O43623 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SNAI2O43623 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC15.5■□□□□ 0.07
SNAI2O43623 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNAI2O43623 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SNAI2O43623 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SNAI2O43623 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SNAI2O43623 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNAI2O43623 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNAI2O43623 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SNAI2O43623 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.5■□□□□ 0.07
SNAI2O43623 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
SNAI2O43623 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.5■□□□□ 0.07
SNAI2O43623 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SNAI2O43623 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SNAI2O43623 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
SNAI2O43623 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNAI2O43623 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
SNAI2O43623 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SNAI2O43623 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNAI2O43623 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNAI2O43623 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNAI2O43623 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SNAI2O43623 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNAI2O43623 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SNAI2O43623 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNAI2O43623 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNAI2O43623 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNAI2O43623 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNAI2O43623 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SNAI2O43623 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNAI2O43623 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNAI2O43623 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNAI2O43623 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNAI2O43623 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SNAI2O43623 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.49■□□□□ 0.07
SNAI2O43623 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.49■□□□□ 0.07
SNAI2O43623 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.49■□□□□ 0.07
SNAI2O43623 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
SNAI2O43623 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.49■□□□□ 0.07
SNAI2O43623 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNAI2O43623 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNAI2O43623 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.48■□□□□ 0.07
SNAI2O43623 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNAI2O43623 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SNAI2O43623 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SNAI2O43623 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNAI2O43623 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
SNAI2O43623 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
SNAI2O43623 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNAI2O43623 PCDHAC2-203ENST00000615316 3011 ntBASIC15.48■□□□□ 0.07
SNAI2O43623 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNAI2O43623 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.48■□□□□ 0.07
SNAI2O43623 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNAI2O43623 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC15.48■□□□□ 0.07
SNAI2O43623 AC006455.2-201ENST00000429931 906 ntBASIC15.48■□□□□ 0.07
SNAI2O43623 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC15.48■□□□□ 0.07
SNAI2O43623 MIR6724-1-201ENST00000616420 92 ntBASIC15.48■□□□□ 0.07
SNAI2O43623 MIR6724-2-201ENST00000616483 92 ntBASIC15.48■□□□□ 0.07
SNAI2O43623 MIR6724-4-201ENST00000617390 92 ntBASIC15.48■□□□□ 0.07
SNAI2O43623 MIR6724-3-201ENST00000622482 92 ntBASIC15.48■□□□□ 0.07
SNAI2O43623 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC15.48■□□□□ 0.07
SNAI2O43623 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SNAI2O43623 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SNAI2O43623 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNAI2O43623 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNAI2O43623 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNAI2O43623 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms