Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
XRCC2O43543 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.08■□□□□ 0.48
XRCC2O43543 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.08■□□□□ 0.48
XRCC2O43543 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
XRCC2O43543 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
XRCC2O43543 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
XRCC2O43543 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
XRCC2O43543 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
XRCC2O43543 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
XRCC2O43543 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
XRCC2O43543 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
XRCC2O43543 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
XRCC2O43543 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.07■□□□□ 0.48
XRCC2O43543 AC138907.5-202ENST00000569484 235 ntBASIC18.07■□□□□ 0.48
XRCC2O43543 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.07■□□□□ 0.48
XRCC2O43543 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.07■□□□□ 0.48
XRCC2O43543 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
XRCC2O43543 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
XRCC2O43543 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.06■□□□□ 0.48
XRCC2O43543 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
XRCC2O43543 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
XRCC2O43543 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
XRCC2O43543 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.06■□□□□ 0.48
XRCC2O43543 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.06■□□□□ 0.48
XRCC2O43543 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.06■□□□□ 0.48
XRCC2O43543 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.06■□□□□ 0.48
XRCC2O43543 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
XRCC2O43543 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
XRCC2O43543 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
XRCC2O43543 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
XRCC2O43543 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
XRCC2O43543 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
XRCC2O43543 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
XRCC2O43543 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
XRCC2O43543 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
XRCC2O43543 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
XRCC2O43543 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.05■□□□□ 0.48
XRCC2O43543 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
XRCC2O43543 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
XRCC2O43543 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.05■□□□□ 0.48
XRCC2O43543 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
XRCC2O43543 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.05■□□□□ 0.48
XRCC2O43543 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.05■□□□□ 0.48
XRCC2O43543 TERF1P2-201ENST00000583350 1212 ntBASIC18.05■□□□□ 0.48
XRCC2O43543 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.05■□□□□ 0.48
XRCC2O43543 AC120498.10-201ENST00000621827 505 ntBASIC18.05■□□□□ 0.48
XRCC2O43543 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
XRCC2O43543 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
XRCC2O43543 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.05■□□□□ 0.48
XRCC2O43543 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.05■□□□□ 0.48
XRCC2O43543 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.04■□□□□ 0.48
XRCC2O43543 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
XRCC2O43543 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
XRCC2O43543 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
XRCC2O43543 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
XRCC2O43543 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
XRCC2O43543 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.04■□□□□ 0.48
XRCC2O43543 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.04■□□□□ 0.48
XRCC2O43543 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
XRCC2O43543 ZNRF2P3-201ENST00000424200 374 ntBASIC18.04■□□□□ 0.48
XRCC2O43543 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.04■□□□□ 0.48
XRCC2O43543 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.04■□□□□ 0.48
XRCC2O43543 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.04■□□□□ 0.48
XRCC2O43543 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
XRCC2O43543 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
XRCC2O43543 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.04■□□□□ 0.48
XRCC2O43543 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
XRCC2O43543 AC061975.6-201ENST00000579045 1553 ntBASIC18.04■□□□□ 0.48
XRCC2O43543 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
XRCC2O43543 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
XRCC2O43543 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
XRCC2O43543 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
XRCC2O43543 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
XRCC2O43543 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
XRCC2O43543 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
XRCC2O43543 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
XRCC2O43543 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.03■□□□□ 0.48
XRCC2O43543 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.03■□□□□ 0.48
XRCC2O43543 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.03■□□□□ 0.48
XRCC2O43543 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.03■□□□□ 0.48
XRCC2O43543 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.03■□□□□ 0.48
XRCC2O43543 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
XRCC2O43543 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.03■□□□□ 0.48
XRCC2O43543 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.03■□□□□ 0.48
XRCC2O43543 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
XRCC2O43543 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
XRCC2O43543 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
XRCC2O43543 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
XRCC2O43543 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
XRCC2O43543 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
XRCC2O43543 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
XRCC2O43543 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
XRCC2O43543 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
XRCC2O43543 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
XRCC2O43543 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
XRCC2O43543 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
XRCC2O43543 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
XRCC2O43543 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.02■□□□□ 0.48
XRCC2O43543 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
XRCC2O43543 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms