Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
UPK2O00526 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPK2O00526 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UPK2O00526 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.72■□□□□ 0.27
UPK2O00526 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.72■□□□□ 0.27
UPK2O00526 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.72■□□□□ 0.27
UPK2O00526 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK2O00526 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.72■□□□□ 0.27
UPK2O00526 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK2O00526 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK2O00526 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK2O00526 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK2O00526 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK2O00526 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK2O00526 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.72■□□□□ 0.27
UPK2O00526 EEF1DP3-203ENST00000566025 782 ntBASIC16.72■□□□□ 0.27
UPK2O00526 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.72■□□□□ 0.27
UPK2O00526 AC053503.5-201ENST00000601508 636 ntBASIC16.72■□□□□ 0.27
UPK2O00526 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK2O00526 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK2O00526 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
UPK2O00526 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UPK2O00526 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
UPK2O00526 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
UPK2O00526 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK2O00526 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.71■□□□□ 0.27
UPK2O00526 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK2O00526 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.71■□□□□ 0.27
UPK2O00526 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UPK2O00526 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK2O00526 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UPK2O00526 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.71■□□□□ 0.27
UPK2O00526 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.71■□□□□ 0.27
UPK2O00526 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UPK2O00526 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.71■□□□□ 0.27
UPK2O00526 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.71■□□□□ 0.27
UPK2O00526 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK2O00526 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.71■□□□□ 0.27
UPK2O00526 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UPK2O00526 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
UPK2O00526 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
UPK2O00526 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
UPK2O00526 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
UPK2O00526 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK2O00526 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK2O00526 SLC25A24-204ENST00000569674 2357 ntBASIC16.7■□□□□ 0.26
UPK2O00526 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK2O00526 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
UPK2O00526 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK2O00526 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.7■□□□□ 0.26
UPK2O00526 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK2O00526 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK2O00526 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK2O00526 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK2O00526 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
UPK2O00526 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
UPK2O00526 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK2O00526 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.7■□□□□ 0.26
UPK2O00526 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.7■□□□□ 0.26
UPK2O00526 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK2O00526 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK2O00526 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UPK2O00526 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UPK2O00526 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK2O00526 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK2O00526 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK2O00526 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
UPK2O00526 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.69■□□□□ 0.26
UPK2O00526 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK2O00526 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
UPK2O00526 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
UPK2O00526 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK2O00526 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK2O00526 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.69■□□□□ 0.26
UPK2O00526 SUDS3P1-201ENST00000505831 966 ntBASIC16.69■□□□□ 0.26
UPK2O00526 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.69■□□□□ 0.26
UPK2O00526 AL354811.1-201ENST00000610286 706 ntBASIC16.69■□□□□ 0.26
UPK2O00526 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK2O00526 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.69■□□□□ 0.26
UPK2O00526 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UPK2O00526 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK2O00526 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.69■□□□□ 0.26
UPK2O00526 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK2O00526 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UPK2O00526 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UPK2O00526 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK2O00526 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK2O00526 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK2O00526 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK2O00526 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.68■□□□□ 0.26
UPK2O00526 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.68■□□□□ 0.26
UPK2O00526 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK2O00526 GABARAPL3-202ENST00000624044 1851 ntBASIC16.68■□□□□ 0.26
UPK2O00526 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK2O00526 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UPK2O00526 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.68■□□□□ 0.26
UPK2O00526 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.68■□□□□ 0.26
UPK2O00526 TPRG1LP1-201ENST00000598702 760 ntBASIC16.68■□□□□ 0.26
UPK2O00526 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
UPK2O00526 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms