Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RNF223E7ERA6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF223E7ERA6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF223E7ERA6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF223E7ERA6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF223E7ERA6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF223E7ERA6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF223E7ERA6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF223E7ERA6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
RNF223E7ERA6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF223E7ERA6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF223E7ERA6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF223E7ERA6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RNF223E7ERA6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF223E7ERA6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF223E7ERA6 MCRIP2P1-201ENST00000394346 511 ntBASIC17.33■□□□□ 0.36
RNF223E7ERA6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.33■□□□□ 0.36
RNF223E7ERA6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF223E7ERA6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF223E7ERA6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF223E7ERA6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF223E7ERA6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF223E7ERA6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
RNF223E7ERA6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
RNF223E7ERA6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF223E7ERA6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF223E7ERA6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF223E7ERA6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF223E7ERA6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RNF223E7ERA6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF223E7ERA6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RNF223E7ERA6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF223E7ERA6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RNF223E7ERA6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF223E7ERA6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF223E7ERA6 SOX15-203ENST00000570788 1093 ntBASIC17.32■□□□□ 0.36
RNF223E7ERA6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
RNF223E7ERA6 RN7SL471P-201ENST00000580476 299 ntBASIC17.32■□□□□ 0.36
RNF223E7ERA6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF223E7ERA6 AC073912.3-201ENST00000624414 853 ntBASIC17.32■□□□□ 0.36
RNF223E7ERA6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF223E7ERA6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF223E7ERA6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF223E7ERA6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF223E7ERA6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF223E7ERA6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
RNF223E7ERA6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF223E7ERA6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF223E7ERA6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF223E7ERA6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF223E7ERA6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF223E7ERA6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF223E7ERA6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF223E7ERA6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF223E7ERA6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF223E7ERA6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF223E7ERA6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF223E7ERA6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF223E7ERA6 KRT18P68-201ENST00000392293 1000 ntBASIC17.31■□□□□ 0.36
RNF223E7ERA6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RNF223E7ERA6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF223E7ERA6 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.31■□□□□ 0.36
RNF223E7ERA6 SNORA78-201ENST00000459373 127 ntBASIC17.31■□□□□ 0.36
RNF223E7ERA6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF223E7ERA6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF223E7ERA6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF223E7ERA6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.31■□□□□ 0.36
RNF223E7ERA6 AC233263.1-201ENST00000578059 224 ntBASIC17.31■□□□□ 0.36
RNF223E7ERA6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.31■□□□□ 0.36
RNF223E7ERA6 Z99916.2-201ENST00000604037 246 ntBASIC17.31■□□□□ 0.36
RNF223E7ERA6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.31■□□□□ 0.36
RNF223E7ERA6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RNF223E7ERA6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF223E7ERA6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF223E7ERA6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RNF223E7ERA6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF223E7ERA6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RNF223E7ERA6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF223E7ERA6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF223E7ERA6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF223E7ERA6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF223E7ERA6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF223E7ERA6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF223E7ERA6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF223E7ERA6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF223E7ERA6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RNF223E7ERA6 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.3■□□□□ 0.36
RNF223E7ERA6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RNF223E7ERA6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF223E7ERA6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF223E7ERA6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF223E7ERA6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF223E7ERA6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF223E7ERA6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF223E7ERA6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF223E7ERA6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
RNF223E7ERA6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF223E7ERA6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF223E7ERA6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF223E7ERA6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms