Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP99D6REC4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.76■□□□□ 0.91
CFAP99D6REC4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP99D6REC4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP99D6REC4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP99D6REC4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CFAP99D6REC4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.76■□□□□ 0.91
CFAP99D6REC4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP99D6REC4 KRT18P61-201ENST00000585825 1298 ntBASIC20.76■□□□□ 0.91
CFAP99D6REC4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP99D6REC4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP99D6REC4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CFAP99D6REC4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.75■□□□□ 0.91
CFAP99D6REC4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.75■□□□□ 0.91
CFAP99D6REC4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CFAP99D6REC4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP99D6REC4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP99D6REC4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.75■□□□□ 0.91
CFAP99D6REC4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP99D6REC4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CFAP99D6REC4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP99D6REC4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.75■□□□□ 0.91
CFAP99D6REC4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP99D6REC4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.75■□□□□ 0.91
CFAP99D6REC4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.75■□□□□ 0.91
CFAP99D6REC4 KRT16P2-201ENST00000414673 1423 ntBASIC20.75■□□□□ 0.91
CFAP99D6REC4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP99D6REC4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP99D6REC4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP99D6REC4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP99D6REC4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
CFAP99D6REC4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP99D6REC4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP99D6REC4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP99D6REC4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP99D6REC4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.74■□□□□ 0.91
CFAP99D6REC4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.74■□□□□ 0.91
CFAP99D6REC4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP99D6REC4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CFAP99D6REC4 KRT18P11-201ENST00000435214 1283 ntBASIC20.74■□□□□ 0.91
CFAP99D6REC4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CFAP99D6REC4 AC137761.2-201ENST00000561729 223 ntBASIC20.74■□□□□ 0.91
CFAP99D6REC4 AC145350.3-201ENST00000569033 163 ntBASIC20.74■□□□□ 0.91
CFAP99D6REC4 AC061975.6-201ENST00000579045 1553 ntBASIC20.74■□□□□ 0.91
CFAP99D6REC4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CFAP99D6REC4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP99D6REC4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.74■□□□□ 0.91
CFAP99D6REC4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP99D6REC4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP99D6REC4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP99D6REC4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.74■□□□□ 0.91
CFAP99D6REC4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.73■□□□□ 0.91
CFAP99D6REC4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.73■□□□□ 0.91
CFAP99D6REC4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP99D6REC4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP99D6REC4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CFAP99D6REC4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP99D6REC4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.73■□□□□ 0.91
CFAP99D6REC4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.73■□□□□ 0.91
CFAP99D6REC4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.73■□□□□ 0.91
CFAP99D6REC4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.73■□□□□ 0.91
CFAP99D6REC4 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.73■□□□□ 0.91
CFAP99D6REC4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP99D6REC4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP99D6REC4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CFAP99D6REC4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CFAP99D6REC4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CFAP99D6REC4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP99D6REC4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP99D6REC4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.72■□□□□ 0.91
CFAP99D6REC4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CFAP99D6REC4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CFAP99D6REC4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CFAP99D6REC4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CFAP99D6REC4 AC016769.1-201ENST00000409132 1010 ntBASIC20.72■□□□□ 0.91
CFAP99D6REC4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CFAP99D6REC4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CFAP99D6REC4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.72■□□□□ 0.91
CFAP99D6REC4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.72■□□□□ 0.91
CFAP99D6REC4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CFAP99D6REC4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.72■□□□□ 0.91
CFAP99D6REC4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CFAP99D6REC4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CFAP99D6REC4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CFAP99D6REC4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CFAP99D6REC4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.72■□□□□ 0.91
CFAP99D6REC4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CFAP99D6REC4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.72■□□□□ 0.91
CFAP99D6REC4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CFAP99D6REC4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CFAP99D6REC4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CFAP99D6REC4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CFAP99D6REC4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CFAP99D6REC4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CFAP99D6REC4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CFAP99D6REC4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CFAP99D6REC4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CFAP99D6REC4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CFAP99D6REC4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CFAP99D6REC4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms