Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC144AA2RUR9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC144AA2RUR9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC30.16■■■□□ 2.42
CCDC144AA2RUR9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC30.16■■■□□ 2.42
CCDC144AA2RUR9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC144AA2RUR9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC144AA2RUR9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
CCDC144AA2RUR9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC30.15■■■□□ 2.42
CCDC144AA2RUR9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC30.15■■■□□ 2.42
CCDC144AA2RUR9 OR2A1-AS1-201ENST00000462305 773 ntBASIC30.15■■■□□ 2.42
CCDC144AA2RUR9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC30.15■■■□□ 2.42
CCDC144AA2RUR9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC30.15■■■□□ 2.42
CCDC144AA2RUR9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC30.15■■■□□ 2.42
CCDC144AA2RUR9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC30.15■■■□□ 2.42
CCDC144AA2RUR9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.42
CCDC144AA2RUR9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC144AA2RUR9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC30.14■■■□□ 2.42
CCDC144AA2RUR9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC30.14■■■□□ 2.42
CCDC144AA2RUR9 FAM201B-201ENST00000458407 597 ntBASIC30.14■■■□□ 2.42
CCDC144AA2RUR9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC30.14■■■□□ 2.42
CCDC144AA2RUR9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC30.14■■■□□ 2.42
CCDC144AA2RUR9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC30.14■■■□□ 2.42
CCDC144AA2RUR9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC144AA2RUR9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC144AA2RUR9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC30.14■■■□□ 2.42
CCDC144AA2RUR9 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CCDC144AA2RUR9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CCDC144AA2RUR9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
CCDC144AA2RUR9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC30.13■■■□□ 2.41
CCDC144AA2RUR9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC30.13■■■□□ 2.41
CCDC144AA2RUR9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC30.13■■■□□ 2.41
CCDC144AA2RUR9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC30.13■■■□□ 2.41
CCDC144AA2RUR9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC30.13■■■□□ 2.41
CCDC144AA2RUR9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC30.13■■■□□ 2.41
CCDC144AA2RUR9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
CCDC144AA2RUR9 LSM12P1-201ENST00000411836 588 ntBASIC30.13■■■□□ 2.41
CCDC144AA2RUR9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC30.13■■■□□ 2.41
CCDC144AA2RUR9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CCDC144AA2RUR9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CCDC144AA2RUR9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC30.12■■■□□ 2.41
CCDC144AA2RUR9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC144AA2RUR9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC144AA2RUR9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC144AA2RUR9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC144AA2RUR9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
CCDC144AA2RUR9 MCRIP2P1-201ENST00000394346 511 ntBASIC30.12■■■□□ 2.41
CCDC144AA2RUR9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC144AA2RUR9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC30.12■■■□□ 2.41
CCDC144AA2RUR9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
CCDC144AA2RUR9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC144AA2RUR9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC144AA2RUR9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC30.11■■■□□ 2.41
CCDC144AA2RUR9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC144AA2RUR9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC144AA2RUR9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC30.11■■■□□ 2.41
CCDC144AA2RUR9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC144AA2RUR9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC30.11■■■□□ 2.41
CCDC144AA2RUR9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC30.11■■■□□ 2.41
CCDC144AA2RUR9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC30.11■■■□□ 2.41
CCDC144AA2RUR9 ITM2C-210ENST00000620962 501 ntBASIC30.11■■■□□ 2.41
CCDC144AA2RUR9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC144AA2RUR9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC144AA2RUR9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC144AA2RUR9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC30.1■■■□□ 2.41
CCDC144AA2RUR9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC144AA2RUR9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC144AA2RUR9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC30.1■■■□□ 2.41
CCDC144AA2RUR9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC144AA2RUR9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC144AA2RUR9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC144AA2RUR9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC30.1■■■□□ 2.41
CCDC144AA2RUR9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC30.1■■■□□ 2.41
CCDC144AA2RUR9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC30.1■■■□□ 2.41
CCDC144AA2RUR9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC30.1■■■□□ 2.41
CCDC144AA2RUR9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC30.1■■■□□ 2.41
CCDC144AA2RUR9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC144AA2RUR9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC144AA2RUR9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC144AA2RUR9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC144AA2RUR9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
CCDC144AA2RUR9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC30.09■■■□□ 2.41
CCDC144AA2RUR9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC144AA2RUR9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC30.09■■■□□ 2.41
CCDC144AA2RUR9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC30.09■■■□□ 2.41
CCDC144AA2RUR9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC30.09■■■□□ 2.41
CCDC144AA2RUR9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
CCDC144AA2RUR9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC30.09■■■□□ 2.41
CCDC144AA2RUR9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC30.09■■■□□ 2.41
CCDC144AA2RUR9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC30.09■■■□□ 2.41
CCDC144AA2RUR9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC144AA2RUR9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC144AA2RUR9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
CCDC144AA2RUR9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC144AA2RUR9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC144AA2RUR9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC144AA2RUR9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC30.08■■■□□ 2.41
CCDC144AA2RUR9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC144AA2RUR9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC144AA2RUR9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC144AA2RUR9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms