Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC163A0A0D9SF12 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC163A0A0D9SF12 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC163A0A0D9SF12 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
CCDC163A0A0D9SF12 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC163A0A0D9SF12 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC163A0A0D9SF12 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC163A0A0D9SF12 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC163A0A0D9SF12 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC163A0A0D9SF12 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC163A0A0D9SF12 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC163A0A0D9SF12 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC163A0A0D9SF12 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC163A0A0D9SF12 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC163A0A0D9SF12 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC163A0A0D9SF12 AC007322.3-201ENST00000426526 701 ntBASIC20.79■□□□□ 0.92
CCDC163A0A0D9SF12 AC233263.1-201ENST00000578059 224 ntBASIC20.79■□□□□ 0.92
CCDC163A0A0D9SF12 AC233702.5-201ENST00000584107 538 ntBASIC20.79■□□□□ 0.92
CCDC163A0A0D9SF12 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC163A0A0D9SF12 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC163A0A0D9SF12 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC163A0A0D9SF12 KRT17P2-201ENST00000300992 1314 ntBASIC20.78■□□□□ 0.92
CCDC163A0A0D9SF12 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC163A0A0D9SF12 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC163A0A0D9SF12 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC163A0A0D9SF12 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC163A0A0D9SF12 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC163A0A0D9SF12 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC163A0A0D9SF12 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC163A0A0D9SF12 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC163A0A0D9SF12 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC163A0A0D9SF12 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC163A0A0D9SF12 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC163A0A0D9SF12 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC163A0A0D9SF12 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC163A0A0D9SF12 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC163A0A0D9SF12 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CCDC163A0A0D9SF12 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC163A0A0D9SF12 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CCDC163A0A0D9SF12 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC163A0A0D9SF12 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC163A0A0D9SF12 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC163A0A0D9SF12 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC163A0A0D9SF12 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC163A0A0D9SF12 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CCDC163A0A0D9SF12 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC163A0A0D9SF12 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC163A0A0D9SF12 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC163A0A0D9SF12 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 BX088651.1-201ENST00000540551 451 ntBASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 AP001412.1-201ENST00000608405 714 ntBASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC163A0A0D9SF12 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC163A0A0D9SF12 RPS2P55-201ENST00000397318 883 ntBASIC20.75■□□□□ 0.91
CCDC163A0A0D9SF12 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC163A0A0D9SF12 AC107956.1-201ENST00000494359 873 ntBASIC20.75■□□□□ 0.91
CCDC163A0A0D9SF12 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.75■□□□□ 0.91
CCDC163A0A0D9SF12 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.75■□□□□ 0.91
CCDC163A0A0D9SF12 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC163A0A0D9SF12 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC163A0A0D9SF12 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC163A0A0D9SF12 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCDC163A0A0D9SF12 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.75■□□□□ 0.91
CCDC163A0A0D9SF12 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC163A0A0D9SF12 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC163A0A0D9SF12 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC163A0A0D9SF12 AC133681.1-201ENST00000465482 601 ntBASIC20.74■□□□□ 0.91
CCDC163A0A0D9SF12 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC163A0A0D9SF12 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC163A0A0D9SF12 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC163A0A0D9SF12 AC105020.6-201ENST00000621523 1217 ntBASIC20.74■□□□□ 0.91
CCDC163A0A0D9SF12 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCDC163A0A0D9SF12 CYP21A1P-202ENST00000354927 1481 ntBASIC20.74■□□□□ 0.91
CCDC163A0A0D9SF12 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.74■□□□□ 0.91
CCDC163A0A0D9SF12 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC163A0A0D9SF12 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC163A0A0D9SF12 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC163A0A0D9SF12 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC163A0A0D9SF12 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC163A0A0D9SF12 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC163A0A0D9SF12 AC010331.1-201ENST00000611423 582 ntBASIC20.73■□□□□ 0.91
CCDC163A0A0D9SF12 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.73■□□□□ 0.91
CCDC163A0A0D9SF12 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms