Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
TBC1D3EA0A087X179 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TBC1D3EA0A087X179 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TBC1D3EA0A087X179 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TBC1D3EA0A087X179 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
TBC1D3EA0A087X179 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TBC1D3EA0A087X179 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.81■□□□□ 0.92
TBC1D3EA0A087X179 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TBC1D3EA0A087X179 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
TBC1D3EA0A087X179 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D3EA0A087X179 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D3EA0A087X179 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.8■□□□□ 0.92
TBC1D3EA0A087X179 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TBC1D3EA0A087X179 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D3EA0A087X179 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.8■□□□□ 0.92
TBC1D3EA0A087X179 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.8■□□□□ 0.92
TBC1D3EA0A087X179 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D3EA0A087X179 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TBC1D3EA0A087X179 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D3EA0A087X179 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D3EA0A087X179 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D3EA0A087X179 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 GUSBP5-202ENST00000510805 1989 ntBASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 LSM12P1-201ENST00000411836 588 ntBASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 FAM21FP-204ENST00000608637 956 ntBASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TBC1D3EA0A087X179 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3EA0A087X179 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
TBC1D3EA0A087X179 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3EA0A087X179 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3EA0A087X179 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3EA0A087X179 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3EA0A087X179 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3EA0A087X179 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.78■□□□□ 0.92
TBC1D3EA0A087X179 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3EA0A087X179 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
TBC1D3EA0A087X179 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.78■□□□□ 0.92
TBC1D3EA0A087X179 DUSP5P2-201ENST00000426873 1033 ntBASIC20.78■□□□□ 0.92
TBC1D3EA0A087X179 AC091874.3-201ENST00000512672 1195 ntBASIC20.78■□□□□ 0.92
TBC1D3EA0A087X179 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3EA0A087X179 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.78■□□□□ 0.92
TBC1D3EA0A087X179 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D3EA0A087X179 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TBC1D3EA0A087X179 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D3EA0A087X179 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D3EA0A087X179 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D3EA0A087X179 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D3EA0A087X179 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.77■□□□□ 0.92
TBC1D3EA0A087X179 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.77■□□□□ 0.92
TBC1D3EA0A087X179 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.77■□□□□ 0.92
TBC1D3EA0A087X179 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.77■□□□□ 0.92
TBC1D3EA0A087X179 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.77■□□□□ 0.92
TBC1D3EA0A087X179 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.77■□□□□ 0.92
TBC1D3EA0A087X179 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.77■□□□□ 0.92
TBC1D3EA0A087X179 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D3EA0A087X179 AC083880.1-201ENST00000608266 535 ntBASIC20.77■□□□□ 0.92
TBC1D3EA0A087X179 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.77■□□□□ 0.92
TBC1D3EA0A087X179 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.77■□□□□ 0.92
TBC1D3EA0A087X179 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D3EA0A087X179 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.77■□□□□ 0.92
TBC1D3EA0A087X179 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
TBC1D3EA0A087X179 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TBC1D3EA0A087X179 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.77■□□□□ 0.91
TBC1D3EA0A087X179 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TBC1D3EA0A087X179 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3EA0A087X179 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3EA0A087X179 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3EA0A087X179 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3EA0A087X179 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3EA0A087X179 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3EA0A087X179 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.76■□□□□ 0.91
TBC1D3EA0A087X179 AL355472.2-201ENST00000422958 438 ntBASIC20.76■□□□□ 0.91
TBC1D3EA0A087X179 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.76■□□□□ 0.91
TBC1D3EA0A087X179 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.76■□□□□ 0.91
TBC1D3EA0A087X179 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TBC1D3EA0A087X179 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.76■□□□□ 0.91
TBC1D3EA0A087X179 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3EA0A087X179 MYC-209ENST00000641252 345 ntBASIC20.76■□□□□ 0.91
TBC1D3EA0A087X179 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3EA0A087X179 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3EA0A087X179 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3EA0A087X179 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3EA0A087X179 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms