Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 BISPR-209ENST00000635176 1041 ntTSL 2 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 GALM-201ENST00000272252 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 MORC2-201ENST00000215862 4469 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 SPATA31E1-201ENST00000325643 4478 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 SYNJ1-211ENST00000630077 6898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 PTPN2-203ENST00000353319 1542 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 AL391244.3-201ENST00000607307 1523 ntBASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 STRADA-231ENST00000638708 2153 ntTSL 2 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 ENTPD7-201ENST00000370489 3550 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 KCNB2-201ENST00000523207 3582 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 STXBP1-209ENST00000626539 3840 ntTSL 5 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 FGD3-203ENST00000416701 3432 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 KIF24-201ENST00000379174 5729 ntTSL 5 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 PPIG-202ENST00000409714 2615 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 BNC2-202ENST00000380667 3361 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 SLC6A2-203ENST00000414754 3201 ntTSL 5 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 CPSF1P1-201ENST00000397477 3730 ntBASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 IFT46-207ENST00000530872 1566 ntTSL 5 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 MID1-211ENST00000610939 1839 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 THY1-201ENST00000284240 3556 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 PLA2G4D-201ENST00000290472 3584 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 CD226-206ENST00000581982 2157 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 NECAP1-216ENST00000639167 2197 ntTSL 5 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 LINC00211-201ENST00000413792 1923 ntTSL 2 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 NLRP1-216ENST00000617618 4788 ntAPPRIS P4 TSL 5 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 ANKRD45-201ENST00000333279 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 TRIM26-266ENST00000437089 3250 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 LILRB2-203ENST00000391748 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 PIEZO2-210ENST00000580640 8334 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 CHRM3-207ENST00000615928 2294 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 POLR2M-202ENST00000380557 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 NREP-201ENST00000257435 2013 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 MRPL10-201ENST00000290208 2013 ntTSL 2 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 MIR4435-2HG-202ENST00000371162 2044 ntBASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 GTSE1-201ENST00000454366 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 CD22-203ENST00000419549 2642 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 SERPINB3-202ENST00000332821 1541 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 AL772363.1-201ENST00000371390 3222 ntTSL 2 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 RPL21-201ENST00000272274 616 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 OR10Z1-201ENST00000361284 942 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 RN7SKP80-201ENST00000365188 283 ntBASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 LINC01643-201ENST00000412218 757 ntTSL 5 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 PPIAP29-201ENST00000414949 499 ntBASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 FRG2FP-203ENST00000422555 567 ntTSL 4 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 ULBP3-202ENST00000438272 735 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 OGFRP1-203ENST00000446578 551 ntTSL 4 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 OR2S1P-201ENST00000447226 950 ntBASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 AC005237.1-201ENST00000458377 559 ntTSL 4 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 ACOT9-207ENST00000492081 683 ntTSL 3 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 TCEAL4-212ENST00000494801 1008 ntAPPRIS P3 TSL 2 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 C5orf66-203ENST00000513931 474 ntTSL 3 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 CDC42P5-201ENST00000518654 553 ntBASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 AL121988.1-201ENST00000542839 560 ntTSL 5 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 LITAF-207ENST00000571459 677 ntTSL 5 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 NDUFA6-AS1-208ENST00000600968 662 ntTSL 5 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 UNGP3-201ENST00000603734 675 ntBASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 AL049794.1-201ENST00000616572 774 ntTSL 2 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 AC005609.3-201ENST00000624566 577 ntBASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 AL390961.1-202ENST00000636744 1172 ntBASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 AC005906.2-214ENST00000640128 1235 ntTSL 5 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 RPL31-201ENST00000264258 1865 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 GRM3-201ENST00000361669 4268 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 GSDMB-203ENST00000394175 1626 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 CCNB1IP1-203ENST00000398160 1613 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 PDYN-201ENST00000217305 2555 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 MS4A8-201ENST00000300226 1353 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 CLVS2-202ENST00000368438 1359 ntTSL 5 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 STK36-202ENST00000392105 4821 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 CORO1C-212ENST00000549772 1710 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 ME1-201ENST00000369705 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 DDX11L9-201ENST00000559159 1488 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 AC083902.2-201ENST00000511828 10086 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 APPL2-213ENST00000551662 2190 ntTSL 2 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 SERINC4-202ENST00000319327 2630 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 TPK1-203ENST00000378099 2283 ntTSL 3 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 TTC26-210ENST00000495038 1599 ntTSL 2 BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
NPIPA3F8WFD2 APOBEC3C-201ENST00000361441 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 RCC1-203ENST00000373833 2844 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 TSPAN14-206ENST00000372164 5476 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AP2M1-222ENST00000621863 1305 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AL353597.3-201ENST00000624365 3745 ntBASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 BMF-202ENST00000397573 4545 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 SYNE1-240ENST00000610489 1754 ntTSL 5 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AKR1D1-202ENST00000411726 2234 ntTSL 2 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 ANKUB1-202ENST00000462519 2222 ntTSL 2 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 NPIPB7-202ENST00000452313 1406 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 OPCML-207ENST00000541867 6277 ntTSL 5 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 OPCML-208ENST00000612177 6250 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 PPP2R2B-204ENST00000394413 1982 ntTSL 2 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 ALDH18A1-201ENST00000371221 3337 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 CDH1-214ENST00000621016 3304 ntTSL 5 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AC004147.2-201ENST00000583224 3753 ntTSL 5 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 BBS1-201ENST00000318312 3423 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AL137127.1-201ENST00000606379 3402 ntBASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 C17orf77-202ENST00000392620 2525 ntTSL 2 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 AC079354.1-201ENST00000409819 3093 ntTSL 2 BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 C6orf222-201ENST00000437635 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
NPIPA3F8WFD2 PSMB7-201ENST00000259457 980 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms